Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01548A6NM66 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC01548A6NM66 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LINC01548A6NM66 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01548A6NM66 AC133552.2-201ENST00000619106 1032 ntBASIC19.29■□□□□ 0.68
LINC01548A6NM66 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01548A6NM66 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LINC01548A6NM66 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01548A6NM66 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01548A6NM66 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01548A6NM66 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01548A6NM66 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.28■□□□□ 0.68
LINC01548A6NM66 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01548A6NM66 NTF6A-201ENST00000591175 560 ntBASIC19.28■□□□□ 0.68
LINC01548A6NM66 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
LINC01548A6NM66 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.27■□□□□ 0.68
LINC01548A6NM66 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LINC01548A6NM66 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LINC01548A6NM66 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01548A6NM66 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.26■□□□□ 0.67
LINC01548A6NM66 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01548A6NM66 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01548A6NM66 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01548A6NM66 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01548A6NM66 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.26■□□□□ 0.67
LINC01548A6NM66 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.26■□□□□ 0.67
LINC01548A6NM66 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
LINC01548A6NM66 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01548A6NM66 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LINC01548A6NM66 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.25■□□□□ 0.67
LINC01548A6NM66 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LINC01548A6NM66 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LINC01548A6NM66 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
LINC01548A6NM66 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01548A6NM66 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01548A6NM66 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01548A6NM66 KRT18P60-201ENST00000312876 1297 ntBASIC19.24■□□□□ 0.67
LINC01548A6NM66 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01548A6NM66 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01548A6NM66 RAP2CP1-202ENST00000605179 643 ntBASIC19.24■□□□□ 0.67
LINC01548A6NM66 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
LINC01548A6NM66 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LINC01548A6NM66 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.23■□□□□ 0.67
LINC01548A6NM66 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01548A6NM66 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.23■□□□□ 0.67
LINC01548A6NM66 AL592293.1-201ENST00000502889 1188 ntBASIC19.23■□□□□ 0.67
LINC01548A6NM66 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LINC01548A6NM66 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01548A6NM66 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01548A6NM66 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01548A6NM66 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.22■□□□□ 0.67
LINC01548A6NM66 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LINC01548A6NM66 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01548A6NM66 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.22■□□□□ 0.67
LINC01548A6NM66 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01548A6NM66 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01548A6NM66 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.21■□□□□ 0.67
LINC01548A6NM66 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LINC01548A6NM66 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LINC01548A6NM66 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
LINC01548A6NM66 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01548A6NM66 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01548A6NM66 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01548A6NM66 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01548A6NM66 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01548A6NM66 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.2■□□□□ 0.66
LINC01548A6NM66 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01548A6NM66 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01548A6NM66 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01548A6NM66 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01548A6NM66 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.19■□□□□ 0.66
LINC01548A6NM66 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01548A6NM66 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01548A6NM66 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01548A6NM66 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.19■□□□□ 0.66
LINC01548A6NM66 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.19■□□□□ 0.66
LINC01548A6NM66 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01548A6NM66 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01548A6NM66 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01548A6NM66 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
LINC01548A6NM66 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01548A6NM66 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01548A6NM66 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01548A6NM66 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01548A6NM66 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LINC01548A6NM66 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01548A6NM66 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01548A6NM66 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.17■□□□□ 0.66
LINC01548A6NM66 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.17■□□□□ 0.66
LINC01548A6NM66 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01548A6NM66 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01548A6NM66 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01548A6NM66 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01548A6NM66 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
LINC01548A6NM66 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC01548A6NM66 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC01548A6NM66 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01548A6NM66 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC01548A6NM66 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC01548A6NM66 SPCS2P3-201ENST00000500401 656 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms