Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.59■□□□□ 0.41
SMIM9A6NGZ8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM9A6NGZ8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM9A6NGZ8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.59■□□□□ 0.41
SMIM9A6NGZ8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM9A6NGZ8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM9A6NGZ8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMIM9A6NGZ8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMIM9A6NGZ8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.58■□□□□ 0.4
SMIM9A6NGZ8 AC026202.3-201ENST00000600805 1127 ntBASIC17.58■□□□□ 0.4
SMIM9A6NGZ8 AC133552.2-201ENST00000619106 1032 ntBASIC17.58■□□□□ 0.4
SMIM9A6NGZ8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM9A6NGZ8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM9A6NGZ8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM9A6NGZ8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM9A6NGZ8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM9A6NGZ8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SMIM9A6NGZ8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM9A6NGZ8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SMIM9A6NGZ8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.57■□□□□ 0.4
SMIM9A6NGZ8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM9A6NGZ8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMIM9A6NGZ8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM9A6NGZ8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMIM9A6NGZ8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM9A6NGZ8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMIM9A6NGZ8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SMIM9A6NGZ8 NTF6A-201ENST00000591175 560 ntBASIC17.56■□□□□ 0.4
SMIM9A6NGZ8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM9A6NGZ8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SMIM9A6NGZ8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM9A6NGZ8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM9A6NGZ8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 RAP2CP1-202ENST00000605179 643 ntBASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 AL121749.1-202ENST00000609313 2153 ntBASIC17.55■□□□□ 0.4
SMIM9A6NGZ8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM9A6NGZ8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM9A6NGZ8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM9A6NGZ8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMIM9A6NGZ8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.54■□□□□ 0.4
SMIM9A6NGZ8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SMIM9A6NGZ8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SMIM9A6NGZ8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM9A6NGZ8 AC009831.1-201ENST00000580420 1582 ntBASIC17.53■□□□□ 0.4
SMIM9A6NGZ8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM9A6NGZ8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM9A6NGZ8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM9A6NGZ8 KRT18P10-201ENST00000388836 1287 ntBASIC17.53■□□□□ 0.4
SMIM9A6NGZ8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM9A6NGZ8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM9A6NGZ8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM9A6NGZ8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM9A6NGZ8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.53■□□□□ 0.4
SMIM9A6NGZ8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.52■□□□□ 0.4
SMIM9A6NGZ8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM9A6NGZ8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMIM9A6NGZ8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SMIM9A6NGZ8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.52■□□□□ 0.39
SMIM9A6NGZ8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.52■□□□□ 0.39
SMIM9A6NGZ8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SMIM9A6NGZ8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMIM9A6NGZ8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
SMIM9A6NGZ8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 U85056.1-201ENST00000616429 682 ntBASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SMIM9A6NGZ8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.5■□□□□ 0.39
SMIM9A6NGZ8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM9A6NGZ8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM9A6NGZ8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM9A6NGZ8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM9A6NGZ8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.5■□□□□ 0.39
SMIM9A6NGZ8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM9A6NGZ8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM9A6NGZ8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SMIM9A6NGZ8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM9A6NGZ8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM9A6NGZ8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.49■□□□□ 0.39
SMIM9A6NGZ8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM9A6NGZ8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM9A6NGZ8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SMIM9A6NGZ8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM9A6NGZ8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM9A6NGZ8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM9A6NGZ8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms