Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV4A0A0C4DH28 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV4A0A0C4DH28 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.38■□□□□ 0.37
TRGV4A0A0C4DH28 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.38■□□□□ 0.37
TRGV4A0A0C4DH28 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV4A0A0C4DH28 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV4A0A0C4DH28 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.37■□□□□ 0.37
TRGV4A0A0C4DH28 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.37■□□□□ 0.37
TRGV4A0A0C4DH28 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TRGV4A0A0C4DH28 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV4A0A0C4DH28 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV4A0A0C4DH28 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV4A0A0C4DH28 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.37■□□□□ 0.37
TRGV4A0A0C4DH28 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV4A0A0C4DH28 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV4A0A0C4DH28 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
TRGV4A0A0C4DH28 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV4A0A0C4DH28 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.36■□□□□ 0.37
TRGV4A0A0C4DH28 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.36■□□□□ 0.37
TRGV4A0A0C4DH28 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV4A0A0C4DH28 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV4A0A0C4DH28 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV4A0A0C4DH28 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV4A0A0C4DH28 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRGV4A0A0C4DH28 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.35■□□□□ 0.37
TRGV4A0A0C4DH28 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.35■□□□□ 0.37
TRGV4A0A0C4DH28 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV4A0A0C4DH28 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV4A0A0C4DH28 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.35■□□□□ 0.37
TRGV4A0A0C4DH28 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV4A0A0C4DH28 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV4A0A0C4DH28 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRGV4A0A0C4DH28 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRGV4A0A0C4DH28 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV4A0A0C4DH28 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.33■□□□□ 0.36
TRGV4A0A0C4DH28 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.33■□□□□ 0.36
TRGV4A0A0C4DH28 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV4A0A0C4DH28 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.33■□□□□ 0.36
TRGV4A0A0C4DH28 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV4A0A0C4DH28 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 AL359504.2-201ENST00000605506 1601 ntBASIC17.32■□□□□ 0.36
TRGV4A0A0C4DH28 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRGV4A0A0C4DH28 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV4A0A0C4DH28 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.31■□□□□ 0.36
TRGV4A0A0C4DH28 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRGV4A0A0C4DH28 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.31■□□□□ 0.36
TRGV4A0A0C4DH28 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV4A0A0C4DH28 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV4A0A0C4DH28 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV4A0A0C4DH28 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRGV4A0A0C4DH28 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV4A0A0C4DH28 AC091060.1-201ENST00000623524 1766 ntBASIC17.3■□□□□ 0.36
TRGV4A0A0C4DH28 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRGV4A0A0C4DH28 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.3■□□□□ 0.36
TRGV4A0A0C4DH28 AC092803.2-201ENST00000564287 1899 ntBASIC17.3■□□□□ 0.36
TRGV4A0A0C4DH28 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.3■□□□□ 0.36
TRGV4A0A0C4DH28 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TRGV4A0A0C4DH28 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV4A0A0C4DH28 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV4A0A0C4DH28 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.29■□□□□ 0.36
TRGV4A0A0C4DH28 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV4A0A0C4DH28 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV4A0A0C4DH28 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV4A0A0C4DH28 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV4A0A0C4DH28 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.28■□□□□ 0.36
TRGV4A0A0C4DH28 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV4A0A0C4DH28 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV4A0A0C4DH28 AC145676.1-201ENST00000514988 2004 ntBASIC17.28■□□□□ 0.36
TRGV4A0A0C4DH28 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV4A0A0C4DH28 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV4A0A0C4DH28 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.27■□□□□ 0.36
TRGV4A0A0C4DH28 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.27■□□□□ 0.36
TRGV4A0A0C4DH28 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 AC022413.1-201ENST00000624602 984 ntBASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms