Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV2A0A0B4J234 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV2A0A0B4J234 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV2A0A0B4J234 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.33■□□□□ 0.53
TRAV2A0A0B4J234 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV2A0A0B4J234 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV2A0A0B4J234 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV2A0A0B4J234 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV2A0A0B4J234 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV2A0A0B4J234 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TRAV2A0A0B4J234 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV2A0A0B4J234 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV2A0A0B4J234 MIR3960-201ENST00000583311 91 ntBASIC18.33■□□□□ 0.52
TRAV2A0A0B4J234 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV2A0A0B4J234 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV2A0A0B4J234 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
TRAV2A0A0B4J234 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV2A0A0B4J234 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV2A0A0B4J234 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV2A0A0B4J234 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.32■□□□□ 0.52
TRAV2A0A0B4J234 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.32■□□□□ 0.52
TRAV2A0A0B4J234 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
TRAV2A0A0B4J234 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV2A0A0B4J234 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
TRAV2A0A0B4J234 SMPD5-203ENST00000639008 1464 ntBASIC18.32■□□□□ 0.52
TRAV2A0A0B4J234 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV2A0A0B4J234 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV2A0A0B4J234 AC135731.1-201ENST00000569415 2548 ntBASIC18.31■□□□□ 0.52
TRAV2A0A0B4J234 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV2A0A0B4J234 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRAV2A0A0B4J234 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV2A0A0B4J234 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV2A0A0B4J234 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV2A0A0B4J234 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.3■□□□□ 0.52
TRAV2A0A0B4J234 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV2A0A0B4J234 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV2A0A0B4J234 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV2A0A0B4J234 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV2A0A0B4J234 RNF126P1-201ENST00000567452 1320 ntBASIC18.29■□□□□ 0.52
TRAV2A0A0B4J234 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV2A0A0B4J234 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV2A0A0B4J234 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV2A0A0B4J234 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV2A0A0B4J234 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV2A0A0B4J234 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV2A0A0B4J234 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV2A0A0B4J234 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV2A0A0B4J234 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV2A0A0B4J234 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV2A0A0B4J234 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV2A0A0B4J234 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV2A0A0B4J234 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV2A0A0B4J234 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV2A0A0B4J234 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRAV2A0A0B4J234 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRAV2A0A0B4J234 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV2A0A0B4J234 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV2A0A0B4J234 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.27■□□□□ 0.52
TRAV2A0A0B4J234 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV2A0A0B4J234 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV2A0A0B4J234 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV2A0A0B4J234 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV2A0A0B4J234 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV2A0A0B4J234 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV2A0A0B4J234 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV2A0A0B4J234 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV2A0A0B4J234 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV2A0A0B4J234 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV2A0A0B4J234 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV2A0A0B4J234 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV2A0A0B4J234 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV2A0A0B4J234 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.25■□□□□ 0.51
TRAV2A0A0B4J234 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAV2A0A0B4J234 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 RP9P-202ENST00000450133 1212 ntBASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 AC007029.1-201ENST00000604183 313 ntBASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV2A0A0B4J234 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV2A0A0B4J234 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV2A0A0B4J234 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV2A0A0B4J234 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV2A0A0B4J234 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV2A0A0B4J234 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV2A0A0B4J234 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV2A0A0B4J234 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV2A0A0B4J234 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV2A0A0B4J234 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV2A0A0B4J234 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV2A0A0B4J234 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV2A0A0B4J234 HSD17B1P1-201ENST00000590052 955 ntBASIC18.22■□□□□ 0.51
TRAV2A0A0B4J234 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV2A0A0B4J234 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms