Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 AL162393.1-201ENST00000437852 946 ntBASIC17.39■□□□□ 0.37
TRBV25-1A0A075B6N4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBV25-1A0A075B6N4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV25-1A0A075B6N4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV25-1A0A075B6N4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRBV25-1A0A075B6N4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV25-1A0A075B6N4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRBV25-1A0A075B6N4 LINC00543-201ENST00000567234 1845 ntBASIC17.37■□□□□ 0.37
TRBV25-1A0A075B6N4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV25-1A0A075B6N4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRBV25-1A0A075B6N4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV25-1A0A075B6N4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV25-1A0A075B6N4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV25-1A0A075B6N4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV25-1A0A075B6N4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV25-1A0A075B6N4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV25-1A0A075B6N4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV25-1A0A075B6N4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV25-1A0A075B6N4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV25-1A0A075B6N4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV25-1A0A075B6N4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV25-1A0A075B6N4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV25-1A0A075B6N4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV25-1A0A075B6N4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV25-1A0A075B6N4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV25-1A0A075B6N4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV25-1A0A075B6N4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV25-1A0A075B6N4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV25-1A0A075B6N4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV25-1A0A075B6N4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 ERN1-208ENST00000606895 2068 ntBASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 AC110285.7-201ENST00000624417 1536 ntBASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV25-1A0A075B6N4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
TRBV25-1A0A075B6N4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV25-1A0A075B6N4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRBV25-1A0A075B6N4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.33■□□□□ 0.36
TRBV25-1A0A075B6N4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV25-1A0A075B6N4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV25-1A0A075B6N4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV25-1A0A075B6N4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV25-1A0A075B6N4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV25-1A0A075B6N4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRBV25-1A0A075B6N4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV25-1A0A075B6N4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV25-1A0A075B6N4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV25-1A0A075B6N4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.32■□□□□ 0.36
TRBV25-1A0A075B6N4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV25-1A0A075B6N4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRBV25-1A0A075B6N4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV25-1A0A075B6N4 DUX4L29-201ENST00000425409 679 ntBASIC17.31■□□□□ 0.36
TRBV25-1A0A075B6N4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRBV25-1A0A075B6N4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV25-1A0A075B6N4 AC092803.2-201ENST00000564287 1899 ntBASIC17.31■□□□□ 0.36
TRBV25-1A0A075B6N4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV25-1A0A075B6N4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV25-1A0A075B6N4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV25-1A0A075B6N4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV25-1A0A075B6N4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV25-1A0A075B6N4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.29■□□□□ 0.36
TRBV25-1A0A075B6N4 AC079834.2-201ENST00000609776 1949 ntBASIC17.29■□□□□ 0.36
TRBV25-1A0A075B6N4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV25-1A0A075B6N4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRBV25-1A0A075B6N4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV25-1A0A075B6N4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV25-1A0A075B6N4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV25-1A0A075B6N4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms