Protein–RNA interactions for Protein: Q9Y6R1

SLC4A4, Electrogenic sodium bicarbonate cotransporter 1, humanhuman

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A4Q9Y6R1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 AC120114.3-201ENST00000611923 658 ntBASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 AL139327.4-201ENST00000612362 153 ntBASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 AC008735.5-201ENST00000623544 497 ntBASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC4A4Q9Y6R1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 AP000347.1-202ENST00000435868 847 ntBASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 AC133963.1-201ENST00000504166 1679 ntBASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 AC068880.1-201ENST00000507289 2297 ntBASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC4A4Q9Y6R1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 AC046185.3-201ENST00000623228 1824 ntBASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 BX640515.1-201ENST00000617215 977 ntBASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 AL589182.2-201ENST00000619332 1049 ntBASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC4A4Q9Y6R1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 AC097637.2-201ENST00000624096 1997 ntBASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 AP002414.3-201ENST00000589352 1468 ntBASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 LYSMD4-203ENST00000378904 2122 ntBASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 AC092910.1-201ENST00000482027 1129 ntBASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 AC105339.3-201ENST00000560043 636 ntBASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC4A4Q9Y6R1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC4A4Q9Y6R1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC4A4Q9Y6R1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC4A4Q9Y6R1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC4A4Q9Y6R1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC4A4Q9Y6R1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.83■□□□□ 0.92
SLC4A4Q9Y6R1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC4A4Q9Y6R1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms