Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA9Q9Y5G4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 PMPCAP1-201ENST00000508114 1576 ntBASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 AC096633.1-201ENST00000422446 749 ntBASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 KRT18P27-201ENST00000427733 1299 ntBASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 MTDHP5-201ENST00000598980 586 ntBASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 AC005593.1-201ENST00000624894 515 ntBASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA9Q9Y5G4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 SIGLEC16-201ENST00000599858 1437 ntBASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 AL499627.1-201ENST00000569373 2188 ntBASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 AL139424.1-201ENST00000607572 797 ntBASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 LINC00896-202ENST00000609602 2128 ntBASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA9Q9Y5G4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms