Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NXF3Q9H4D5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 AC008667.4-201ENST00000607370 168 ntBASIC18.87■□□□□ 0.61
NXF3Q9H4D5 AC064836.3-201ENST00000607928 673 ntBASIC18.87■□□□□ 0.61
NXF3Q9H4D5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NXF3Q9H4D5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 AL135999.2-201ENST00000622438 1686 ntBASIC18.86■□□□□ 0.61
NXF3Q9H4D5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 RNA5SP416-201ENST00000516838 111 ntBASIC18.86■□□□□ 0.61
NXF3Q9H4D5 IGHV3-65-201ENST00000523210 341 ntBASIC18.86■□□□□ 0.61
NXF3Q9H4D5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 AL139327.4-201ENST00000612362 153 ntBASIC18.86■□□□□ 0.61
NXF3Q9H4D5 LINC01451-201ENST00000623792 534 ntBASIC18.86■□□□□ 0.61
NXF3Q9H4D5 AL805961.1-202ENST00000641562 540 ntBASIC18.86■□□□□ 0.61
NXF3Q9H4D5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 AL355312.1-201ENST00000407115 2176 ntBASIC18.86■□□□□ 0.61
NXF3Q9H4D5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NXF3Q9H4D5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 GPR89P-201ENST00000407924 1495 ntBASIC18.85■□□□□ 0.61
NXF3Q9H4D5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 PTCHD3P3-201ENST00000403073 906 ntBASIC18.85■□□□□ 0.61
NXF3Q9H4D5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 MIR4751-201ENST00000578027 74 ntBASIC18.85■□□□□ 0.61
NXF3Q9H4D5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NXF3Q9H4D5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms