Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 PMS2P2-201ENST00000425039 1128 ntBASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A2Q9BY10 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 KRT19P2-202ENST00000557173 1012 ntBASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 PDPK2P-202ENST00000562415 1191 ntBASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 AL078644.1-201ENST00000609881 752 ntBASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 AL139327.4-201ENST00000612362 153 ntBASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 LINC01451-201ENST00000623792 534 ntBASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 AC025580.3-201ENST00000617932 1424 ntBASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC46A2Q9BY10 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A2Q9BY10 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC46A2Q9BY10 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC46A2Q9BY10 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.96■□□□□ 0.46
SLC46A2Q9BY10 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 MKNK2P1-201ENST00000437526 628 ntBASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC46A2Q9BY10 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms