Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCGF1Q9BSM1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 MST1L-201ENST00000442552 2185 ntBASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 AC026396.1-201ENST00000419388 421 ntBASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.73□□□□□ -0.05
PCGF1Q9BSM1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 CROCCP1-201ENST00000426910 5675 ntBASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms