Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 NKILA-202ENST00000614771 2598 ntBASIC16.6■□□□□ 0.25
COL21A1Q96P44 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
COL21A1Q96P44 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.59■□□□□ 0.25
COL21A1Q96P44 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
COL21A1Q96P44 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 CHCHD2P8-201ENST00000429873 447 ntBASIC16.59■□□□□ 0.25
COL21A1Q96P44 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.59■□□□□ 0.25
COL21A1Q96P44 AC069148.1-201ENST00000608741 768 ntBASIC16.59■□□□□ 0.25
COL21A1Q96P44 IGHV3-41-201ENST00000613121 348 ntBASIC16.59■□□□□ 0.25
COL21A1Q96P44 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COL21A1Q96P44 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
COL21A1Q96P44 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 AC016734.2-201ENST00000624325 1377 ntBASIC16.59■□□□□ 0.25
COL21A1Q96P44 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.59■□□□□ 0.25
COL21A1Q96P44 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.59■□□□□ 0.25
COL21A1Q96P44 AL138688.1-201ENST00000624851 1594 ntBASIC16.59■□□□□ 0.25
COL21A1Q96P44 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL21A1Q96P44 LINC00304-203ENST00000565008 1864 ntBASIC16.59■□□□□ 0.25
COL21A1Q96P44 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
COL21A1Q96P44 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL21A1Q96P44 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
COL21A1Q96P44 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
COL21A1Q96P44 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 TSSC2-201ENST00000450217 709 ntBASIC16.58■□□□□ 0.24
COL21A1Q96P44 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.58■□□□□ 0.24
COL21A1Q96P44 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL21A1Q96P44 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 AC011676.5-201ENST00000624864 2660 ntBASIC16.57■□□□□ 0.24
COL21A1Q96P44 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 AP001094.4-201ENST00000579008 2176 ntBASIC16.57■□□□□ 0.24
COL21A1Q96P44 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 UPK3BP1-201ENST00000428678 509 ntBASIC16.57■□□□□ 0.24
COL21A1Q96P44 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COL21A1Q96P44 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL21A1Q96P44 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms