Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.97■□□□□ 0.63
PGBD4Q96DM1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PGBD4Q96DM1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD4Q96DM1 AC006504.4-201ENST00000592118 1568 ntBASIC18.97■□□□□ 0.63
PGBD4Q96DM1 AC009336.1-201ENST00000608941 1553 ntBASIC18.97■□□□□ 0.63
PGBD4Q96DM1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD4Q96DM1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD4Q96DM1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD4Q96DM1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 ELK2BP-201ENST00000415014 1224 ntBASIC18.96■□□□□ 0.63
PGBD4Q96DM1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD4Q96DM1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PGBD4Q96DM1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 AC018470.1-201ENST00000624790 3129 ntBASIC18.94■□□□□ 0.62
PGBD4Q96DM1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 DNAJB3-201ENST00000446806 729 ntBASIC18.94■□□□□ 0.62
PGBD4Q96DM1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 AC064836.3-201ENST00000607928 673 ntBASIC18.94■□□□□ 0.62
PGBD4Q96DM1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PGBD4Q96DM1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms