Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.77□□□□□ -0.36
CHCHD1Q96BP2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 AC067930.6-201ENST00000623257 4947 ntBASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 AC099343.3-201ENST00000605834 2503 ntBASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 DUX4L16-201ENST00000555130 1264 ntBASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 FAM45BP-202ENST00000592932 1624 ntBASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHCHD1Q96BP2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 DBET-201ENST00000630918 3363 ntBASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHCHD1Q96BP2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHCHD1Q96BP2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms