Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 UBALD1-205ENST00000590891 2641 ntBASIC16.59■□□□□ 0.25
PSD4Q8NDX1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 AC246785.2-201ENST00000432512 513 ntBASIC16.59■□□□□ 0.25
PSD4Q8NDX1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 KRT17P6-201ENST00000453795 1220 ntBASIC16.59■□□□□ 0.25
PSD4Q8NDX1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 AC111152.3-201ENST00000569699 673 ntBASIC16.59■□□□□ 0.25
PSD4Q8NDX1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 AL121894.2-201ENST00000602977 491 ntBASIC16.59■□□□□ 0.25
PSD4Q8NDX1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 AL391005.1-201ENST00000623953 2435 ntBASIC16.59■□□□□ 0.25
PSD4Q8NDX1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PSD4Q8NDX1 LINC00602-201ENST00000629776 2065 ntBASIC16.58■□□□□ 0.25
PSD4Q8NDX1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PSD4Q8NDX1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
PSD4Q8NDX1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PSD4Q8NDX1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 TPM4P1-201ENST00000436100 807 ntBASIC16.58■□□□□ 0.24
PSD4Q8NDX1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PSD4Q8NDX1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 FOSL1P1-201ENST00000511041 816 ntBASIC16.57■□□□□ 0.24
PSD4Q8NDX1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 AL121772.3-201ENST00000610840 674 ntBASIC16.57■□□□□ 0.24
PSD4Q8NDX1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 AL645608.8-201ENST00000606034 2086 ntBASIC16.57■□□□□ 0.24
PSD4Q8NDX1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PSD4Q8NDX1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PSD4Q8NDX1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms