Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 KRT18P65-201ENST00000439811 1286 ntBASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 AF186996.4-201ENST00000467186 377 ntBASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 AC068472.1-201ENST00000474589 881 ntBASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 AC005336.2-201ENST00000593183 939 ntBASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CCDC33Q8N5R6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 KRT18P67-201ENST00000432816 1264 ntBASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 SLC25A1P1-201ENST00000528351 927 ntBASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC33Q8N5R6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC33Q8N5R6 TP73-AS1-210ENST00000637775 1455 ntBASIC18.39■□□□□ 0.54
CCDC33Q8N5R6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC33Q8N5R6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CCDC33Q8N5R6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC33Q8N5R6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CCDC33Q8N5R6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC33Q8N5R6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC33Q8N5R6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms