Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 AC116353.5-201ENST00000638148 1699 ntBASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.44■□□□□ 0.38
NUDCD3Q8IVD9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 MIR1238-201ENST00000408483 83 ntBASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 AL157888.1-201ENST00000631930 593 ntBASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 LINC01311-201ENST00000565162 1445 ntBASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.43■□□□□ 0.38
NUDCD3Q8IVD9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 PCDH8P1-201ENST00000428983 2773 ntBASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 TSPY14P-201ENST00000303979 915 ntBASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.42■□□□□ 0.38
NUDCD3Q8IVD9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 INGX-201ENST00000359239 846 ntBASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 AC005104.2-201ENST00000427818 678 ntBASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms