Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 MIR564-202ENST00000385049 94 ntBASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 AC004980.1-204ENST00000429707 299 ntBASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 AC046185.3-201ENST00000623228 1824 ntBASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.42■□□□□ 0.06
LYSMD2Q8IV50 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 DUTP2-201ENST00000519164 463 ntBASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LYSMD2Q8IV50 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 MTDHP1-201ENST00000605323 784 ntBASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.4■□□□□ 0.06
LYSMD2Q8IV50 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LYSMD2Q8IV50 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms