Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 AC093909.1-201ENST00000504731 1122 ntBASIC20.8■□□□□ 0.92
CTR9Q6PD62 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.8■□□□□ 0.92
CTR9Q6PD62 AC008735.5-201ENST00000623544 497 ntBASIC20.8■□□□□ 0.92
CTR9Q6PD62 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.8■□□□□ 0.92
CTR9Q6PD62 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTR9Q6PD62 LINC00304-203ENST00000565008 1864 ntBASIC20.79■□□□□ 0.92
CTR9Q6PD62 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTR9Q6PD62 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 SLC25A1P1-201ENST00000528351 927 ntBASIC20.79■□□□□ 0.92
CTR9Q6PD62 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.79■□□□□ 0.92
CTR9Q6PD62 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CTR9Q6PD62 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CTR9Q6PD62 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CTR9Q6PD62 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 MYCLP1-201ENST00000372451 1075 ntBASIC20.78■□□□□ 0.92
CTR9Q6PD62 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.78■□□□□ 0.92
CTR9Q6PD62 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.78■□□□□ 0.92
CTR9Q6PD62 LAGE3P1-201ENST00000425356 484 ntBASIC20.78■□□□□ 0.92
CTR9Q6PD62 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 SIGLEC30P-201ENST00000455569 941 ntBASIC20.78■□□□□ 0.92
CTR9Q6PD62 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.78■□□□□ 0.92
CTR9Q6PD62 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.78■□□□□ 0.92
CTR9Q6PD62 LINC01451-201ENST00000623792 534 ntBASIC20.78■□□□□ 0.92
CTR9Q6PD62 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.78■□□□□ 0.92
CTR9Q6PD62 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.78■□□□□ 0.92
CTR9Q6PD62 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CTR9Q6PD62 HLA-J-201ENST00000462773 1622 ntBASIC20.78■□□□□ 0.92
CTR9Q6PD62 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTR9Q6PD62 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTR9Q6PD62 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTR9Q6PD62 AP002414.3-201ENST00000589352 1468 ntBASIC20.77■□□□□ 0.92
CTR9Q6PD62 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTR9Q6PD62 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTR9Q6PD62 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTR9Q6PD62 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CTR9Q6PD62 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.91
CTR9Q6PD62 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTR9Q6PD62 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTR9Q6PD62 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CTR9Q6PD62 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.77■□□□□ 0.91
CTR9Q6PD62 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.77■□□□□ 0.91
CTR9Q6PD62 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTR9Q6PD62 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.77■□□□□ 0.91
CTR9Q6PD62 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.77■□□□□ 0.91
CTR9Q6PD62 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 AL355312.1-201ENST00000407115 2176 ntBASIC20.76■□□□□ 0.91
CTR9Q6PD62 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms