Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 TOB2P1-201ENST00000469761 992 ntBASIC20.93■□□□□ 0.94
RNF20Q5VTR2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF20Q5VTR2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 LINC00265-3P-201ENST00000447588 903 ntBASIC20.92■□□□□ 0.94
RNF20Q5VTR2 MINOS1P3-201ENST00000457048 203 ntBASIC20.92■□□□□ 0.94
RNF20Q5VTR2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 AC011467.2-201ENST00000598425 242 ntBASIC20.92■□□□□ 0.94
RNF20Q5VTR2 AC010331.1-201ENST00000611423 582 ntBASIC20.92■□□□□ 0.94
RNF20Q5VTR2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 AL049757.1-201ENST00000616842 1596 ntBASIC20.92■□□□□ 0.94
RNF20Q5VTR2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RNF20Q5VTR2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 KRT17P6-201ENST00000453795 1220 ntBASIC20.91■□□□□ 0.94
RNF20Q5VTR2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF20Q5VTR2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms