Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN6P56747 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN6P56747 AC004461.1-201ENST00000412461 403 ntBASIC16.77■□□□□ 0.28
CLDN6P56747 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN6P56747 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN6P56747 AC074386.1-202ENST00000463561 864 ntBASIC16.77■□□□□ 0.28
CLDN6P56747 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN6P56747 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN6P56747 AC109322.1-201ENST00000524499 1264 ntBASIC16.77■□□□□ 0.28
CLDN6P56747 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CLDN6P56747 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CLDN6P56747 AC005498.2-205ENST00000593218 784 ntBASIC16.77■□□□□ 0.28
CLDN6P56747 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN6P56747 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CLDN6P56747 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CLDN6P56747 AL805961.1-202ENST00000641562 540 ntBASIC16.77■□□□□ 0.28
CLDN6P56747 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CLDN6P56747 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CLDN6P56747 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN6P56747 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN6P56747 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN6P56747 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLDN6P56747 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.77■□□□□ 0.27
CLDN6P56747 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.77■□□□□ 0.27
CLDN6P56747 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN6P56747 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLDN6P56747 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN6P56747 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN6P56747 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLDN6P56747 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN6P56747 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDN6P56747 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDN6P56747 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN6P56747 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN6P56747 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDN6P56747 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLDN6P56747 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN6P56747 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN6P56747 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN6P56747 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 AC092902.6-201ENST00000641783 218 ntBASIC16.76■□□□□ 0.27
CLDN6P56747 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN6P56747 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLDN6P56747 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN6P56747 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLDN6P56747 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN6P56747 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN6P56747 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN6P56747 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLDN6P56747 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CLDN6P56747 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN6P56747 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLDN6P56747 AC092919.2-201ENST00000623631 1645 ntBASIC16.75■□□□□ 0.27
CLDN6P56747 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CLDN6P56747 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 AC003669.1-201ENST00000334569 611 ntBASIC16.75■□□□□ 0.27
CLDN6P56747 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.75■□□□□ 0.27
CLDN6P56747 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN6P56747 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN6P56747 PAWRP1-201ENST00000451083 565 ntBASIC16.75■□□□□ 0.27
CLDN6P56747 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN6P56747 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms