Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 WASHC3-208ENST00000539515 688 ntTSL 35.1□□□□□ -1.598e-7■□□□□ 10.3
NCBP2P52298 WASHC3-210ENST00000541569 569 ntTSL 21.41□□□□□ -2.188e-7■□□□□ 10.3
NCBP2P52298 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.899e-7■□□□□ 10.3
NCBP2P52298 HEXB-209ENST00000513079 1684 ntTSL 220.34■□□□□ 0.859e-7■□□□□ 10.3
NCBP2P52298 HEXB-213ENST00000515528 876 ntTSL 219.46■□□□□ 0.719e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.43■□□□□ 0.79e-7■□□□□ 10.3
NCBP2P52298 ULK1-204ENST00000540647 1211 ntTSL 217.92■□□□□ 0.469e-7■□□□□ 10.3
NCBP2P52298 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.38■□□□□ 0.379e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-204ENST00000587096 1065 ntTSL 517.04■□□□□ 0.329e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-209ENST00000587985 1754 ntTSL 516.68■□□□□ 0.269e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-211ENST00000590216 789 ntTSL 516.36■□□□□ 0.219e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-205ENST00000587406 1923 ntTSL 515.95■□□□□ 0.149e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.129e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-210ENST00000589448 1799 ntTSL 515.81■□□□□ 0.129e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.79□□□□□ -0.049e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-207ENST00000587915 540 ntTSL 414.6□□□□□ -0.079e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-203ENST00000586357 482 ntTSL 413.24□□□□□ -0.299e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-215ENST00000592369 528 ntTSL 312□□□□□ -0.499e-7■□□□□ 10.3
NCBP2P52298 TMEM161A-214ENST00000592147 347 ntTSL 511.38□□□□□ -0.599e-7■□□□□ 10.3
NCBP2P52298 DEPDC1B-206ENST00000512452 661 ntTSL 212.36□□□□□ -0.431e-7■□□□□ 10.3
NCBP2P52298 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC7.92□□□□□ -1.141e-7■□□□□ 10.3
NCBP2P52298 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.331e-7■□□□□ 10.3
NCBP2P52298 DEPDC1B-205ENST00000512078 1596 ntTSL 26.51□□□□□ -1.371e-7■□□□□ 10.3
NCBP2P52298 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.11e-7■□□□□ 10.3
NCBP2P52298 PDAP1-202ENST00000426447 767 ntTSL 513.05□□□□□ -0.321e-7■□□□□ 10.3
NCBP2P52298 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.82□□□□□ -1.321e-7■□□□□ 10.3
NCBP2P52298 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.61■■□□□ 1.695e-7■□□□□ 10.3
NCBP2P52298 ARMC10-203ENST00000323735 1581 ntTSL 525.04■■□□□ 1.65e-7■□□□□ 10.3
NCBP2P52298 SPNS1-209ENST00000567771 829 ntTSL 323.1■■□□□ 1.295e-7■□□□□ 10.3
NCBP2P52298 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.9■■□□□ 1.265e-7■□□□□ 10.3
NCBP2P52298 RAB22A-202ENST00000488949 1032 ntTSL 322.89■■□□□ 1.255e-7■□□□□ 10.3
NCBP2P52298 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.085e-7■□□□□ 10.3
NCBP2P52298 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.8■■□□□ 1.085e-7■□□□□ 10.3
NCBP2P52298 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.41■■□□□ 1.025e-7■□□□□ 10.3
NCBP2P52298 ARMC10-207ENST00000434153 805 ntTSL 521.23■□□□□ 0.995e-7■□□□□ 10.3
NCBP2P52298 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.11■□□□□ 0.975e-7■□□□□ 10.3
NCBP2P52298 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.32■□□□□ 0.845e-7■□□□□ 10.3
NCBP2P52298 SPNS1-212ENST00000568900 2253 ntTSL 219.76■□□□□ 0.755e-7■□□□□ 10.3
NCBP2P52298 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.12■□□□□ 0.655e-7■□□□□ 10.3
NCBP2P52298 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.555e-7■□□□□ 10.3
NCBP2P52298 ARMC10-201ENST00000306450 1668 ntTSL 517.71■□□□□ 0.435e-7■□□□□ 10.3
NCBP2P52298 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.435e-7■□□□□ 10.3
NCBP2P52298 NUP50-AS1-202ENST00000432502 596 ntTSL 217.68■□□□□ 0.425e-7■□□□□ 10.3
NCBP2P52298 SPNS1-210ENST00000568388 759 ntTSL 317.54■□□□□ 0.45e-7■□□□□ 10.3
NCBP2P52298 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.41■□□□□ 0.385e-7■□□□□ 10.3
NCBP2P52298 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.98■□□□□ 0.315e-7■□□□□ 10.3
NCBP2P52298 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.67■□□□□ 0.265e-7■□□□□ 10.3
NCBP2P52298 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.245e-7■□□□□ 10.3
NCBP2P52298 CUL5-205ENST00000532064 1109 ntTSL 516.46■□□□□ 0.235e-7■□□□□ 10.3
NCBP2P52298 TBC1D16-204ENST00000571872 567 ntTSL 516.1■□□□□ 0.175e-7■□□□□ 10.3
NCBP2P52298 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.79□□□□□ -0.045e-7■□□□□ 10.3
NCBP2P52298 OSMR-AS1-203ENST00000513480 583 ntTSL 414.68□□□□□ -0.065e-7■□□□□ 10.3
NCBP2P52298 SLC1A4-204ENST00000493121 766 ntTSL 514.62□□□□□ -0.075e-7■□□□□ 10.3
NCBP2P52298 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.26□□□□□ -0.455e-7■□□□□ 10.3
NCBP2P52298 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.22□□□□□ -0.455e-7■□□□□ 10.3
NCBP2P52298 SLC1A4-202ENST00000471551 461 ntTSL 412.21□□□□□ -0.455e-7■□□□□ 10.3
NCBP2P52298 CUL5-202ENST00000526303 751 ntTSL 211.53□□□□□ -0.565e-7■□□□□ 10.3
NCBP2P52298 IMMP2L-210ENST00000492938 587 ntTSL 311.43□□□□□ -0.585e-7■□□□□ 10.3
NCBP2P52298 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.645e-7■□□□□ 10.3
NCBP2P52298 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.675e-7■□□□□ 10.3
NCBP2P52298 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC10.64□□□□□ -0.715e-7■□□□□ 10.3
NCBP2P52298 MORF4L1-217ENST00000559690 680 ntTSL 38.83□□□□□ -15e-7■□□□□ 10.3
NCBP2P52298 MORF4L1-212ENST00000559158 793 ntTSL 35.98□□□□□ -1.455e-7■□□□□ 10.3
NCBP2P52298 MORF4L1-221ENST00000560422 761 ntTSL 55.87□□□□□ -1.475e-7■□□□□ 10.3
NCBP2P52298 MORF4L1-213ENST00000559244 582 ntTSL 35.85□□□□□ -1.475e-7■□□□□ 10.3
NCBP2P52298 MORF4L1-207ENST00000558539 595 ntTSL 54.3□□□□□ -1.725e-7■□□□□ 10.3
NCBP2P52298 MORF4L1-219ENST00000559751 639 ntTSL 54□□□□□ -1.775e-7■□□□□ 10.3
NCBP2P52298 NT5C3B-207ENST00000470690 1729 ntTSL 522.91■■□□□ 1.268e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-212ENST00000495317 836 ntTSL 522.17■■□□□ 1.148e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-216ENST00000523903 1534 ntTSL 1 (best)20.61■□□□□ 0.898e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-201ENST00000393910 1253 ntTSL 219.65■□□□□ 0.748e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-208ENST00000475053 675 ntTSL 319.65■□□□□ 0.748e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-209ENST00000476921 1081 ntTSL 319.65■□□□□ 0.748e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-204ENST00000445655 922 ntTSL 219.51■□□□□ 0.718e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-205ENST00000460893 964 ntTSL 318.5■□□□□ 0.558e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.478e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-206ENST00000469698 1573 ntTSL 317.05■□□□□ 0.328e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-202ENST00000415460 730 ntTSL 516.38■□□□□ 0.218e-9■□□□□ 10.3
NCBP2P52298 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15□□□□□ -0.018e-9■□□□□ 10.3
NCBP2P52298 VMP1-216ENST00000592790 4325 nt3.36□□□□□ -1.872e-25■□□□□ 10.3
NCBP2P52298 VMP1-205ENST00000587470 995 ntTSL 23.3□□□□□ -1.882e-25■□□□□ 10.3
NCBP2P52298 GPCPD1-206ENST00000481690 819 ntTSL 320.24■□□□□ 0.837e-7■□□□□ 10.3
NCBP2P52298 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.347e-7■□□□□ 10.3
NCBP2P52298 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.771e-7■□□□□ 10.3
NCBP2P52298 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.22■□□□□ 0.032e-6■□□□□ 10.3
NCBP2P52298 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.324e-9■□□□□ 10.3
NCBP2P52298 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.24e-9■□□□□ 10.3
NCBP2P52298 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.81■■□□□ 1.568e-9■□□□□ 10.3
NCBP2P52298 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.848e-9■□□□□ 10.3
NCBP2P52298 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.73■□□□□ 0.758e-9■□□□□ 10.3
NCBP2P52298 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.518e-9■□□□□ 10.3
NCBP2P52298 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.328e-9■□□□□ 10.3
NCBP2P52298 PGGHG-205ENST00000474221 4418 ntTSL 213.7□□□□□ -0.223e-6■□□□□ 10.3
NCBP2P52298 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.56□□□□□ -0.43e-6■□□□□ 10.3
NCBP2P52298 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.463e-6■□□□□ 10.3
NCBP2P52298 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC11.69□□□□□ -0.543e-6■□□□□ 10.3
NCBP2P52298 ANKZF1-214ENST00000467884 1090 ntTSL 513.15□□□□□ -0.31e-6■□□□□ 10.3
NCBP2P52298 ANKZF1-226ENST00000496346 1290 ntTSL 212.21□□□□□ -0.451e-6■□□□□ 10.3
NCBP2P52298 ANKZF1-210ENST00000461731 1566 ntTSL 212.19□□□□□ -0.461e-6■□□□□ 10.3
NCBP2P52298 PPP1R35-204ENST00000487452 965 ntTSL 225.96■■□□□ 1.759e-7■□□□□ 10.3
Retrieved 100 of 18,329 protein–RNA pairs in 650 ms