Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
MDH1P40925 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 SLC25A1P3-201ENST00000395415 828 ntBASIC17.63■□□□□ 0.41
MDH1P40925 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.63■□□□□ 0.41
MDH1P40925 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.63■□□□□ 0.41
MDH1P40925 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
MDH1P40925 AC026271.3-201ENST00000571884 352 ntBASIC17.63■□□□□ 0.41
MDH1P40925 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.63■□□□□ 0.41
MDH1P40925 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.63■□□□□ 0.41
MDH1P40925 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
MDH1P40925 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.63■□□□□ 0.41
MDH1P40925 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.63■□□□□ 0.41
MDH1P40925 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.63■□□□□ 0.41
MDH1P40925 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
MDH1P40925 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.63■□□□□ 0.41
MDH1P40925 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MDH1P40925 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.63■□□□□ 0.41
MDH1P40925 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.63■□□□□ 0.41
MDH1P40925 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.63■□□□□ 0.41
MDH1P40925 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.63■□□□□ 0.41
MDH1P40925 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MDH1P40925 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
MDH1P40925 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MDH1P40925 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MDH1P40925 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
MDH1P40925 SLC29A4P1-201ENST00000398760 971 ntBASIC17.62■□□□□ 0.41
MDH1P40925 CROCCP5-201ENST00000436658 830 ntBASIC17.62■□□□□ 0.41
MDH1P40925 GUSBP6-202ENST00000438529 1198 ntBASIC17.62■□□□□ 0.41
MDH1P40925 AC026185.1-201ENST00000445748 174 ntBASIC17.62■□□□□ 0.41
MDH1P40925 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
MDH1P40925 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.62■□□□□ 0.41
MDH1P40925 AL353708.3-201ENST00000610272 989 ntBASIC17.62■□□□□ 0.41
MDH1P40925 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.62■□□□□ 0.41
MDH1P40925 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MDH1P40925 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MDH1P40925 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
MDH1P40925 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.61■□□□□ 0.41
MDH1P40925 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
MDH1P40925 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.61■□□□□ 0.41
MDH1P40925 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.61■□□□□ 0.41
MDH1P40925 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.61■□□□□ 0.41
MDH1P40925 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.61■□□□□ 0.41
MDH1P40925 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MDH1P40925 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.61■□□□□ 0.41
MDH1P40925 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.61■□□□□ 0.41
MDH1P40925 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MDH1P40925 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.61■□□□□ 0.41
MDH1P40925 AC011506.1-201ENST00000474329 610 ntBASIC17.61■□□□□ 0.41
MDH1P40925 MIR3180-4-201ENST00000582223 153 ntBASIC17.61■□□□□ 0.41
MDH1P40925 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.61■□□□□ 0.41
MDH1P40925 IKBKGP1-201ENST00000612193 1073 ntBASIC17.61■□□□□ 0.41
MDH1P40925 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms