Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GDNFP39905 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.3■□□□□ 0.04
GDNFP39905 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GDNFP39905 FAM87A-204ENST00000613235 858 ntBASIC15.3■□□□□ 0.04
GDNFP39905 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GDNFP39905 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.3■□□□□ 0.04
GDNFP39905 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GDNFP39905 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.3■□□□□ 0.04
GDNFP39905 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GDNFP39905 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GDNFP39905 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
GDNFP39905 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.29■□□□□ 0.04
GDNFP39905 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GDNFP39905 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GDNFP39905 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.29■□□□□ 0.04
GDNFP39905 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 LINC01568-207ENST00000641790 1380 ntBASIC15.29■□□□□ 0.04
GDNFP39905 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.29■□□□□ 0.04
GDNFP39905 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.29■□□□□ 0.04
GDNFP39905 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.29■□□□□ 0.04
GDNFP39905 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
GDNFP39905 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.29■□□□□ 0.04
GDNFP39905 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.29■□□□□ 0.04
GDNFP39905 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.29■□□□□ 0.04
GDNFP39905 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GDNFP39905 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDNFP39905 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.28■□□□□ 0.04
GDNFP39905 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GDNFP39905 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.28■□□□□ 0.04
GDNFP39905 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GDNFP39905 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.28■□□□□ 0.04
GDNFP39905 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
GDNFP39905 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.28■□□□□ 0.04
GDNFP39905 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
GDNFP39905 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 AC010653.2-201ENST00000623505 997 ntBASIC15.28■□□□□ 0.04
GDNFP39905 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GDNFP39905 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GDNFP39905 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GDNFP39905 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
GDNFP39905 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.28■□□□□ 0.04
GDNFP39905 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDNFP39905 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.27■□□□□ 0.04
GDNFP39905 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GDNFP39905 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
GDNFP39905 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.27■□□□□ 0.04
GDNFP39905 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GDNFP39905 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.27■□□□□ 0.04
GDNFP39905 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GDNFP39905 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.27■□□□□ 0.04
GDNFP39905 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
GDNFP39905 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.27■□□□□ 0.04
GDNFP39905 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.27■□□□□ 0.04
GDNFP39905 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GDNFP39905 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GDNFP39905 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.27■□□□□ 0.04
GDNFP39905 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
GDNFP39905 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GDNFP39905 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.27■□□□□ 0.04
GDNFP39905 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.27■□□□□ 0.04
GDNFP39905 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.27■□□□□ 0.04
GDNFP39905 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GDNFP39905 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GDNFP39905 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.27■□□□□ 0.03
GDNFP39905 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms