Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN7P35236 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PTPN7P35236 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN7P35236 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN7P35236 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN7P35236 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN7P35236 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN7P35236 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN7P35236 FAM220CP-201ENST00000395253 831 ntBASIC18.11■□□□□ 0.49
PTPN7P35236 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN7P35236 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPN7P35236 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN7P35236 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPN7P35236 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN7P35236 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN7P35236 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN7P35236 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN7P35236 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN7P35236 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN7P35236 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN7P35236 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN7P35236 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN7P35236 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
PTPN7P35236 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN7P35236 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTPN7P35236 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN7P35236 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PTPN7P35236 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PTPN7P35236 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN7P35236 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTPN7P35236 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN7P35236 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN7P35236 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.1■□□□□ 0.49
PTPN7P35236 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTPN7P35236 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN7P35236 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 STK25P1-201ENST00000585406 838 ntBASIC18.1■□□□□ 0.49
PTPN7P35236 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PTPN7P35236 AC011676.5-201ENST00000624864 2660 ntBASIC18.1■□□□□ 0.49
PTPN7P35236 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN7P35236 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN7P35236 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN7P35236 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN7P35236 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN7P35236 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PTPN7P35236 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PTPN7P35236 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 AL353593.2-201ENST00000602529 1483 ntBASIC18.09■□□□□ 0.49
PTPN7P35236 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PTPN7P35236 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN7P35236 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN7P35236 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.09■□□□□ 0.49
PTPN7P35236 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 AC111152.3-201ENST00000569699 673 ntBASIC18.09■□□□□ 0.49
PTPN7P35236 AC011840.4-201ENST00000578471 627 ntBASIC18.09■□□□□ 0.49
PTPN7P35236 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN7P35236 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.09■□□□□ 0.49
PTPN7P35236 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.09■□□□□ 0.49
PTPN7P35236 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PTPN7P35236 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PTPN7P35236 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN7P35236 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN7P35236 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.08■□□□□ 0.49
PTPN7P35236 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PTPN7P35236 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN7P35236 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN7P35236 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN7P35236 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PTPN7P35236 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN7P35236 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.08■□□□□ 0.49
PTPN7P35236 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN7P35236 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN7P35236 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.08■□□□□ 0.49
PTPN7P35236 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.08■□□□□ 0.49
PTPN7P35236 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN7P35236 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN7P35236 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.08■□□□□ 0.48
PTPN7P35236 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN7P35236 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN7P35236 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN7P35236 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms