Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL11A1P12107 AL135744.1-201ENST00000565098 629 ntBASIC19.72■□□□□ 0.75
COL11A1P12107 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.72■□□□□ 0.75
COL11A1P12107 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
COL11A1P12107 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A1P12107 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL11A1P12107 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.72■□□□□ 0.75
COL11A1P12107 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A1P12107 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A1P12107 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A1P12107 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A1P12107 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL11A1P12107 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.72■□□□□ 0.75
COL11A1P12107 SPDYE11-202ENST00000450699 704 ntBASIC19.72■□□□□ 0.75
COL11A1P12107 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.72■□□□□ 0.75
COL11A1P12107 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.72■□□□□ 0.75
COL11A1P12107 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.72■□□□□ 0.75
COL11A1P12107 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.72■□□□□ 0.75
COL11A1P12107 SPDYE9P-201ENST00000570642 692 ntBASIC19.72■□□□□ 0.75
COL11A1P12107 AP002472.1-201ENST00000577490 586 ntBASIC19.72■□□□□ 0.75
COL11A1P12107 SPDYE10P-202ENST00000612005 668 ntBASIC19.72■□□□□ 0.75
COL11A1P12107 SPDYE8P-202ENST00000612377 668 ntBASIC19.72■□□□□ 0.75
COL11A1P12107 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.72■□□□□ 0.75
COL11A1P12107 AC093028.1-201ENST00000622998 982 ntBASIC19.72■□□□□ 0.75
COL11A1P12107 AC012317.2-201ENST00000623305 2251 ntBASIC19.71■□□□□ 0.75
COL11A1P12107 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.71■□□□□ 0.75
COL11A1P12107 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.71■□□□□ 0.75
COL11A1P12107 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.71■□□□□ 0.75
COL11A1P12107 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.71■□□□□ 0.75
COL11A1P12107 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
COL11A1P12107 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.71■□□□□ 0.75
COL11A1P12107 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.71■□□□□ 0.75
COL11A1P12107 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
COL11A1P12107 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 AL645939.2-201ENST00000427340 991 ntBASIC19.71■□□□□ 0.75
COL11A1P12107 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.71■□□□□ 0.75
COL11A1P12107 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.71■□□□□ 0.75
COL11A1P12107 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.71■□□□□ 0.75
COL11A1P12107 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.71■□□□□ 0.75
COL11A1P12107 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.71■□□□□ 0.75
COL11A1P12107 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.71■□□□□ 0.75
COL11A1P12107 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
COL11A1P12107 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL11A1P12107 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL11A1P12107 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.7■□□□□ 0.74
COL11A1P12107 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.7■□□□□ 0.74
COL11A1P12107 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL11A1P12107 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.7■□□□□ 0.74
COL11A1P12107 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.7■□□□□ 0.74
COL11A1P12107 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.7■□□□□ 0.74
COL11A1P12107 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 KRT18P28-201ENST00000453838 1332 ntBASIC19.7■□□□□ 0.74
COL11A1P12107 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A1P12107 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.7■□□□□ 0.74
COL11A1P12107 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A1P12107 AC074386.1-202ENST00000463561 864 ntBASIC19.69■□□□□ 0.74
COL11A1P12107 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
COL11A1P12107 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.69■□□□□ 0.74
COL11A1P12107 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL11A1P12107 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.69■□□□□ 0.74
COL11A1P12107 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
COL11A1P12107 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
COL11A1P12107 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A1P12107 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A1P12107 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A1P12107 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL11A1P12107 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A1P12107 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A1P12107 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COL11A1P12107 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A1P12107 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A1P12107 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A1P12107 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A1P12107 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A1P12107 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A1P12107 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A1P12107 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A1P12107 AL627223.1-201ENST00000416693 442 ntBASIC19.69■□□□□ 0.74
COL11A1P12107 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.69■□□□□ 0.74
COL11A1P12107 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
COL11A1P12107 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A1P12107 AL513210.1-201ENST00000629608 234 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms