Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPRFP10586 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PTPRFP10586 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTPRFP10586 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PTPRFP10586 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPRFP10586 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTPRFP10586 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTPRFP10586 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPRFP10586 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PTPRFP10586 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPRFP10586 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPRFP10586 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPRFP10586 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPRFP10586 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PTPRFP10586 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPRFP10586 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPRFP10586 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPRFP10586 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPRFP10586 AC087289.5-201ENST00000586076 3175 ntBASIC19.9■□□□□ 0.78
PTPRFP10586 RNF165-205ENST00000588679 2904 ntBASIC19.9■□□□□ 0.78
PTPRFP10586 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPRFP10586 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPRFP10586 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPRFP10586 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPRFP10586 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPRFP10586 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
PTPRFP10586 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPRFP10586 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPRFP10586 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
PTPRFP10586 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.89■□□□□ 0.78
PTPRFP10586 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPRFP10586 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPRFP10586 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPRFP10586 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPRFP10586 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPRFP10586 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPRFP10586 PMS2P4-201ENST00000412466 1052 ntBASIC19.89■□□□□ 0.77
PTPRFP10586 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPRFP10586 AC069262.1-201ENST00000539058 672 ntBASIC19.89■□□□□ 0.77
PTPRFP10586 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPRFP10586 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPRFP10586 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PTPRFP10586 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPRFP10586 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.89■□□□□ 0.77
PTPRFP10586 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.89■□□□□ 0.77
PTPRFP10586 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPRFP10586 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPRFP10586 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPRFP10586 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPRFP10586 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPRFP10586 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPRFP10586 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPRFP10586 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPRFP10586 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPRFP10586 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PTPRFP10586 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTPRFP10586 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
PTPRFP10586 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
PTPRFP10586 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPRFP10586 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPRFP10586 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPRFP10586 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 SLC25A1P3-201ENST00000395415 828 ntBASIC19.88■□□□□ 0.77
PTPRFP10586 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPRFP10586 AC243562.1-201ENST00000560672 389 ntBASIC19.88■□□□□ 0.77
PTPRFP10586 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PTPRFP10586 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPRFP10586 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PTPRFP10586 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PTPRFP10586 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PTPRFP10586 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PTPRFP10586 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPRFP10586 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 LYSMD4-203ENST00000378904 2122 ntBASIC19.87■□□□□ 0.77
PTPRFP10586 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
PTPRFP10586 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PTPRFP10586 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPRFP10586 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms