Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NHLRC4P0CG21 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 COX20P2-201ENST00000452636 358 ntBASIC12.9□□□□□ -0.34
NHLRC4P0CG21 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 AC106028.4-201ENST00000614509 607 ntBASIC12.9□□□□□ -0.34
NHLRC4P0CG21 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 KRT8P47-201ENST00000604727 1398 ntBASIC12.9□□□□□ -0.34
NHLRC4P0CG21 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NHLRC4P0CG21 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NHLRC4P0CG21 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.9□□□□□ -0.35
NHLRC4P0CG21 PWWP2AP1-201ENST00000429776 2273 ntBASIC12.9□□□□□ -0.35
NHLRC4P0CG21 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
NHLRC4P0CG21 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.9□□□□□ -0.35
NHLRC4P0CG21 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NHLRC4P0CG21 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 AL035633.1-201ENST00000406139 838 ntBASIC12.89□□□□□ -0.35
NHLRC4P0CG21 AC007967.3-201ENST00000434308 558 ntBASIC12.89□□□□□ -0.35
NHLRC4P0CG21 DDX43P3-201ENST00000441064 443 ntBASIC12.89□□□□□ -0.35
NHLRC4P0CG21 ALG1L5P-201ENST00000482043 771 ntBASIC12.89□□□□□ -0.35
NHLRC4P0CG21 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 MIR4751-201ENST00000578027 74 ntBASIC12.89□□□□□ -0.35
NHLRC4P0CG21 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.89□□□□□ -0.35
NHLRC4P0CG21 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms