Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.68■□□□□ 0.1
APOA1P02647 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.68■□□□□ 0.1
APOA1P02647 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.68■□□□□ 0.1
APOA1P02647 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.68■□□□□ 0.1
APOA1P02647 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.68■□□□□ 0.1
APOA1P02647 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
APOA1P02647 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
APOA1P02647 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.68■□□□□ 0.1
APOA1P02647 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
APOA1P02647 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOA1P02647 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
APOA1P02647 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.68■□□□□ 0.1
APOA1P02647 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
APOA1P02647 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
APOA1P02647 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
APOA1P02647 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
APOA1P02647 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.67■□□□□ 0.1
APOA1P02647 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.67■□□□□ 0.1
APOA1P02647 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.67■□□□□ 0.1
APOA1P02647 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
APOA1P02647 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 AC006449.5-201ENST00000610658 2098 ntBASIC15.67■□□□□ 0.1
APOA1P02647 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.67■□□□□ 0.1
APOA1P02647 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.67■□□□□ 0.1
APOA1P02647 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOA1P02647 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.67■□□□□ 0.1
APOA1P02647 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.66■□□□□ 0.1
APOA1P02647 CYP2T1P-202ENST00000641596 2535 ntBASIC15.66■□□□□ 0.1
APOA1P02647 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.66■□□□□ 0.1
APOA1P02647 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.66■□□□□ 0.1
APOA1P02647 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.66■□□□□ 0.1
APOA1P02647 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
APOA1P02647 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
APOA1P02647 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.66■□□□□ 0.1
APOA1P02647 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.66■□□□□ 0.1
APOA1P02647 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.66■□□□□ 0.1
APOA1P02647 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.66■□□□□ 0.1
APOA1P02647 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.66■□□□□ 0.1
APOA1P02647 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 SDHAP2-201ENST00000455183 2001 ntBASIC15.66■□□□□ 0.1
APOA1P02647 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.66■□□□□ 0.1
APOA1P02647 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
APOA1P02647 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.66■□□□□ 0.1
APOA1P02647 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOA1P02647 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APOA1P02647 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.65■□□□□ 0.1
APOA1P02647 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
APOA1P02647 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
APOA1P02647 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOA1P02647 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APOA1P02647 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.65■□□□□ 0.1
APOA1P02647 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
APOA1P02647 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
APOA1P02647 AC034236.2-201ENST00000606662 1610 ntBASIC15.65■□□□□ 0.1
APOA1P02647 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.65■□□□□ 0.1
APOA1P02647 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.65■□□□□ 0.1
APOA1P02647 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOA1P02647 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms