Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
KRT6AP02538 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT6AP02538 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
KRT6AP02538 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KRT6AP02538 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KRT6AP02538 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6AP02538 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6AP02538 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KRT6AP02538 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KRT6AP02538 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6AP02538 LYSMD4-203ENST00000378904 2122 ntBASIC17.01■□□□□ 0.31
KRT6AP02538 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6AP02538 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6AP02538 GUSBP12-201ENST00000513727 720 ntBASIC17.01■□□□□ 0.31
KRT6AP02538 AC022616.7-201ENST00000525383 220 ntBASIC17.01■□□□□ 0.31
KRT6AP02538 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.01■□□□□ 0.31
KRT6AP02538 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT6AP02538 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.01■□□□□ 0.31
KRT6AP02538 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.01■□□□□ 0.31
KRT6AP02538 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6AP02538 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KRT6AP02538 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KRT6AP02538 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
KRT6AP02538 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
KRT6AP02538 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17■□□□□ 0.31
KRT6AP02538 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17■□□□□ 0.31
KRT6AP02538 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 FER1L4-210ENST00000615531 5998 ntBASIC17■□□□□ 0.31
KRT6AP02538 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 PC-208ENST00000529047 1607 ntTSL 3 BASIC17■□□□□ 0.31
KRT6AP02538 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17■□□□□ 0.31
KRT6AP02538 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17■□□□□ 0.31
KRT6AP02538 AL671277.2-201ENST00000458060 996 ntBASIC17■□□□□ 0.31
KRT6AP02538 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17■□□□□ 0.31
KRT6AP02538 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
KRT6AP02538 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 AC083849.1-201ENST00000615227 514 ntBASIC17■□□□□ 0.31
KRT6AP02538 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17■□□□□ 0.31
KRT6AP02538 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
KRT6AP02538 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
KRT6AP02538 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6AP02538 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT6AP02538 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
KRT6AP02538 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
KRT6AP02538 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT6AP02538 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
KRT6AP02538 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT6AP02538 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT6AP02538 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.99■□□□□ 0.31
KRT6AP02538 COX5BP2-201ENST00000392354 334 ntBASIC16.99■□□□□ 0.31
KRT6AP02538 AL645929.1-201ENST00000420084 975 ntBASIC16.99■□□□□ 0.31
KRT6AP02538 SPDYE13P-201ENST00000445314 798 ntBASIC16.99■□□□□ 0.31
KRT6AP02538 AC002558.1-201ENST00000488906 803 ntBASIC16.99■□□□□ 0.31
KRT6AP02538 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT6AP02538 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.99■□□□□ 0.31
KRT6AP02538 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT6AP02538 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT6AP02538 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT6AP02538 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
KRT6AP02538 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
KRT6AP02538 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms