Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CTNND1O60716 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.39■□□□□ 0.86
CTNND1O60716 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.39■□□□□ 0.86
CTNND1O60716 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CTNND1O60716 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.39■□□□□ 0.86
CTNND1O60716 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTNND1O60716 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CTNND1O60716 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTNND1O60716 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.39■□□□□ 0.85
CTNND1O60716 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTNND1O60716 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTNND1O60716 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTNND1O60716 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.39■□□□□ 0.85
CTNND1O60716 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CTNND1O60716 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CTNND1O60716 CYMP-203ENST00000474680 1263 ntBASIC20.39■□□□□ 0.85
CTNND1O60716 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.39■□□□□ 0.85
CTNND1O60716 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.39■□□□□ 0.85
CTNND1O60716 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.39■□□□□ 0.85
CTNND1O60716 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.39■□□□□ 0.85
CTNND1O60716 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTNND1O60716 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
CTNND1O60716 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CTNND1O60716 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTNND1O60716 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CTNND1O60716 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CTNND1O60716 AC093503.3-201ENST00000624917 2352 ntBASIC20.38■□□□□ 0.85
CTNND1O60716 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.38■□□□□ 0.85
CTNND1O60716 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CTNND1O60716 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.38■□□□□ 0.85
CTNND1O60716 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CTNND1O60716 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.38■□□□□ 0.85
CTNND1O60716 LINC02084-201ENST00000606069 1096 ntBASIC20.38■□□□□ 0.85
CTNND1O60716 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CTNND1O60716 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNND1O60716 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNND1O60716 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTNND1O60716 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CTNND1O60716 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.37■□□□□ 0.85
CTNND1O60716 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.37■□□□□ 0.85
CTNND1O60716 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.37■□□□□ 0.85
CTNND1O60716 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNND1O60716 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CTNND1O60716 AL645939.2-201ENST00000427340 991 ntBASIC20.37■□□□□ 0.85
CTNND1O60716 FAM58CP-201ENST00000435741 640 ntBASIC20.37■□□□□ 0.85
CTNND1O60716 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.37■□□□□ 0.85
CTNND1O60716 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTNND1O60716 CXCL1P1-201ENST00000502804 216 ntBASIC20.37■□□□□ 0.85
CTNND1O60716 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.37■□□□□ 0.85
CTNND1O60716 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.37■□□□□ 0.85
CTNND1O60716 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.37■□□□□ 0.85
CTNND1O60716 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.37■□□□□ 0.85
CTNND1O60716 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.37■□□□□ 0.85
CTNND1O60716 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNND1O60716 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNND1O60716 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CTNND1O60716 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTNND1O60716 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTNND1O60716 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNND1O60716 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.36■□□□□ 0.85
CTNND1O60716 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.36■□□□□ 0.85
CTNND1O60716 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
CTNND1O60716 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.36■□□□□ 0.85
CTNND1O60716 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.36■□□□□ 0.85
CTNND1O60716 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.36■□□□□ 0.85
CTNND1O60716 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.36■□□□□ 0.85
CTNND1O60716 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CTNND1O60716 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.36■□□□□ 0.85
CTNND1O60716 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.36■□□□□ 0.85
CTNND1O60716 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CTNND1O60716 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNND1O60716 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNND1O60716 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNND1O60716 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNND1O60716 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.35■□□□□ 0.85
CTNND1O60716 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms