Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGA12O60330 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA12O60330 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 HTR7P1-202ENST00000624664 4411 ntBASIC17.38■□□□□ 0.37
PCDHGA12O60330 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 RPS8P6-201ENST00000426177 609 ntBASIC17.38■□□□□ 0.37
PCDHGA12O60330 BX005266.1-201ENST00000473402 457 ntBASIC17.38■□□□□ 0.37
PCDHGA12O60330 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA12O60330 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA12O60330 SIGLEC16-201ENST00000599858 1437 ntBASIC17.38■□□□□ 0.37
PCDHGA12O60330 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.37■□□□□ 0.37
PCDHGA12O60330 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 AD001527.2-201ENST00000622994 785 ntBASIC17.37■□□□□ 0.37
PCDHGA12O60330 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA12O60330 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA12O60330 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA12O60330 AC073621.1-201ENST00000392730 636 ntBASIC17.36■□□□□ 0.37
PCDHGA12O60330 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA12O60330 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms