Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.72■□□□□ 0.75
CHMP2AO43633 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP2AO43633 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHMP2AO43633 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 AC002558.1-201ENST00000488906 803 ntBASIC19.72■□□□□ 0.75
CHMP2AO43633 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP2AO43633 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.72■□□□□ 0.75
CHMP2AO43633 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP2AO43633 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CHMP2AO43633 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP2AO43633 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2AO43633 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CHMP2AO43633 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CHMP2AO43633 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP2AO43633 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CHMP2AO43633 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHMP2AO43633 LINC00304-203ENST00000565008 1864 ntBASIC19.71■□□□□ 0.75
CHMP2AO43633 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP2AO43633 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP2AO43633 RPS2P1-201ENST00000434010 821 ntBASIC19.71■□□□□ 0.75
CHMP2AO43633 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.71■□□□□ 0.75
CHMP2AO43633 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP2AO43633 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.71■□□□□ 0.75
CHMP2AO43633 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP2AO43633 STK25P1-201ENST00000585406 838 ntBASIC19.71■□□□□ 0.75
CHMP2AO43633 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.71■□□□□ 0.75
CHMP2AO43633 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.71■□□□□ 0.75
CHMP2AO43633 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CHMP2AO43633 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHMP2AO43633 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP2AO43633 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2AO43633 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
CHMP2AO43633 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHMP2AO43633 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP2AO43633 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CHMP2AO43633 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2AO43633 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2AO43633 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2AO43633 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2AO43633 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP2AO43633 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2AO43633 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CHMP2AO43633 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2AO43633 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.7■□□□□ 0.74
CHMP2AO43633 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHMP2AO43633 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2AO43633 AC005104.2-201ENST00000427818 678 ntBASIC19.7■□□□□ 0.74
CHMP2AO43633 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.7■□□□□ 0.74
CHMP2AO43633 HNRNPDP1-201ENST00000439535 754 ntBASIC19.7■□□□□ 0.74
CHMP2AO43633 STK19B-204ENST00000512515 211 ntBASIC19.7■□□□□ 0.74
CHMP2AO43633 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CHMP2AO43633 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.7■□□□□ 0.74
CHMP2AO43633 MTDHP4-201ENST00000600287 670 ntBASIC19.7■□□□□ 0.74
CHMP2AO43633 AC025062.2-201ENST00000605477 670 ntBASIC19.7■□□□□ 0.74
CHMP2AO43633 AL773604.1-201ENST00000617417 272 ntBASIC19.7■□□□□ 0.74
CHMP2AO43633 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHMP2AO43633 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP2AO43633 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2AO43633 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP2AO43633 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CHMP2AO43633 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2AO43633 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2AO43633 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
CHMP2AO43633 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2AO43633 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2AO43633 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2AO43633 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.69■□□□□ 0.74
CHMP2AO43633 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2AO43633 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP2AO43633 NOC2LP2-201ENST00000407594 1944 ntBASIC19.69■□□□□ 0.74
CHMP2AO43633 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP2AO43633 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.69■□□□□ 0.74
CHMP2AO43633 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms