Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.82■□□□□ 0.44
RIPK2O43353 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.82■□□□□ 0.44
RIPK2O43353 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.82■□□□□ 0.44
RIPK2O43353 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.82■□□□□ 0.44
RIPK2O43353 AC024563.2-201ENST00000603282 481 ntBASIC17.82■□□□□ 0.44
RIPK2O43353 AC009154.2-201ENST00000621177 724 ntBASIC17.82■□□□□ 0.44
RIPK2O43353 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.82■□□□□ 0.44
RIPK2O43353 AC006449.5-201ENST00000610658 2098 ntBASIC17.82■□□□□ 0.44
RIPK2O43353 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.82■□□□□ 0.44
RIPK2O43353 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RIPK2O43353 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.82■□□□□ 0.44
RIPK2O43353 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RIPK2O43353 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RIPK2O43353 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.81■□□□□ 0.44
RIPK2O43353 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.81■□□□□ 0.44
RIPK2O43353 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 AC026691.1-201ENST00000602502 2017 ntBASIC17.81■□□□□ 0.44
RIPK2O43353 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RIPK2O43353 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.81■□□□□ 0.44
RIPK2O43353 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.81■□□□□ 0.44
RIPK2O43353 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RIPK2O43353 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.81■□□□□ 0.44
RIPK2O43353 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.81■□□□□ 0.44
RIPK2O43353 EGLN1P1-201ENST00000531623 762 ntBASIC17.81■□□□□ 0.44
RIPK2O43353 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RIPK2O43353 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.81■□□□□ 0.44
RIPK2O43353 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.81■□□□□ 0.44
RIPK2O43353 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.81■□□□□ 0.44
RIPK2O43353 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.81■□□□□ 0.44
RIPK2O43353 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.81■□□□□ 0.44
RIPK2O43353 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.81■□□□□ 0.44
RIPK2O43353 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.81■□□□□ 0.44
RIPK2O43353 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RIPK2O43353 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RIPK2O43353 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.81■□□□□ 0.44
RIPK2O43353 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RIPK2O43353 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.8■□□□□ 0.44
RIPK2O43353 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.8■□□□□ 0.44
RIPK2O43353 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RIPK2O43353 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RIPK2O43353 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 Z99916.2-201ENST00000604037 246 ntBASIC17.8■□□□□ 0.44
RIPK2O43353 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.8■□□□□ 0.44
RIPK2O43353 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.8■□□□□ 0.44
RIPK2O43353 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RIPK2O43353 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RIPK2O43353 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.8■□□□□ 0.44
RIPK2O43353 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.8■□□□□ 0.44
RIPK2O43353 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 AC008741.2-201ENST00000612792 3115 ntBASIC17.8■□□□□ 0.44
RIPK2O43353 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RIPK2O43353 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.79■□□□□ 0.44
RIPK2O43353 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RIPK2O43353 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.79■□□□□ 0.44
RIPK2O43353 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RIPK2O43353 GCSHP5-201ENST00000443090 522 ntBASIC17.79■□□□□ 0.44
RIPK2O43353 AL158047.1-201ENST00000445918 881 ntBASIC17.79■□□□□ 0.44
RIPK2O43353 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.79■□□□□ 0.44
RIPK2O43353 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.79■□□□□ 0.44
RIPK2O43353 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms