Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MID1O15344 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MID1O15344 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.52■□□□□ 0.4
MID1O15344 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.52■□□□□ 0.4
MID1O15344 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
MID1O15344 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
MID1O15344 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MID1O15344 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.52■□□□□ 0.4
MID1O15344 RPS15P9-201ENST00000494093 319 ntBASIC17.52■□□□□ 0.4
MID1O15344 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MID1O15344 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.52■□□□□ 0.4
MID1O15344 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.52■□□□□ 0.4
MID1O15344 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.52■□□□□ 0.4
MID1O15344 AC040169.1-201ENST00000565382 521 ntBASIC17.52■□□□□ 0.4
MID1O15344 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
MID1O15344 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.52■□□□□ 0.4
MID1O15344 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.52■□□□□ 0.4
MID1O15344 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
MID1O15344 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MID1O15344 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.52■□□□□ 0.4
MID1O15344 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MID1O15344 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.52■□□□□ 0.39
MID1O15344 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MID1O15344 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MID1O15344 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MID1O15344 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.52■□□□□ 0.39
MID1O15344 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MID1O15344 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.52■□□□□ 0.39
MID1O15344 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.52■□□□□ 0.39
MID1O15344 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.52■□□□□ 0.39
MID1O15344 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MID1O15344 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
MID1O15344 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.52■□□□□ 0.39
MID1O15344 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MID1O15344 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.52■□□□□ 0.39
MID1O15344 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MID1O15344 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MID1O15344 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 AC023274.1-201ENST00000418278 595 ntBASIC17.51■□□□□ 0.39
MID1O15344 AC005104.2-201ENST00000427818 678 ntBASIC17.51■□□□□ 0.39
MID1O15344 AC108073.2-201ENST00000464002 357 ntBASIC17.51■□□□□ 0.39
MID1O15344 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
MID1O15344 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.51■□□□□ 0.39
MID1O15344 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.51■□□□□ 0.39
MID1O15344 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.51■□□□□ 0.39
MID1O15344 AC010327.4-202ENST00000591484 748 ntBASIC17.51■□□□□ 0.39
MID1O15344 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.51■□□□□ 0.39
MID1O15344 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MID1O15344 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MID1O15344 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MID1O15344 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.51■□□□□ 0.39
MID1O15344 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MID1O15344 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.51■□□□□ 0.39
MID1O15344 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.5■□□□□ 0.39
MID1O15344 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.5■□□□□ 0.39
MID1O15344 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MID1O15344 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 LINC00982-205ENST00000420957 435 ntBASIC17.5■□□□□ 0.39
MID1O15344 MIR4751-201ENST00000578027 74 ntBASIC17.5■□□□□ 0.39
MID1O15344 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.5■□□□□ 0.39
MID1O15344 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.5■□□□□ 0.39
MID1O15344 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
MID1O15344 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.5■□□□□ 0.39
MID1O15344 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.5■□□□□ 0.39
MID1O15344 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.5■□□□□ 0.39
MID1O15344 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MID1O15344 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms