Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM1O00151 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.75■□□□□ 0.27
PDLIM1O00151 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
PDLIM1O00151 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM1O00151 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PDLIM1O00151 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.75■□□□□ 0.27
PDLIM1O00151 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PDLIM1O00151 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PDLIM1O00151 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PDLIM1O00151 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.74■□□□□ 0.27
PDLIM1O00151 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.74■□□□□ 0.27
PDLIM1O00151 MIR149-201ENST00000384879 89 ntBASIC16.74■□□□□ 0.27
PDLIM1O00151 ECEL1P3-201ENST00000427961 737 ntBASIC16.74■□□□□ 0.27
PDLIM1O00151 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.74■□□□□ 0.27
PDLIM1O00151 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.74■□□□□ 0.27
PDLIM1O00151 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PDLIM1O00151 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.74■□□□□ 0.27
PDLIM1O00151 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.74■□□□□ 0.27
PDLIM1O00151 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PDLIM1O00151 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM1O00151 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.74■□□□□ 0.27
PDLIM1O00151 LINC00304-203ENST00000565008 1864 ntBASIC16.73■□□□□ 0.27
PDLIM1O00151 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM1O00151 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
PDLIM1O00151 AC092338.2-201ENST00000568827 1415 ntBASIC16.73■□□□□ 0.27
PDLIM1O00151 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.73■□□□□ 0.27
PDLIM1O00151 AC007950.2-201ENST00000615045 2347 ntBASIC16.73■□□□□ 0.27
PDLIM1O00151 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
PDLIM1O00151 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.73■□□□□ 0.27
PDLIM1O00151 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.73■□□□□ 0.27
PDLIM1O00151 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.73■□□□□ 0.27
PDLIM1O00151 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.73■□□□□ 0.27
PDLIM1O00151 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM1O00151 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.73■□□□□ 0.27
PDLIM1O00151 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 CROCCP1-201ENST00000426910 5675 ntBASIC16.73■□□□□ 0.27
PDLIM1O00151 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.73■□□□□ 0.27
PDLIM1O00151 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.73■□□□□ 0.27
PDLIM1O00151 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDLIM1O00151 LINC01568-207ENST00000641790 1380 ntBASIC16.73■□□□□ 0.27
PDLIM1O00151 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM1O00151 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.73■□□□□ 0.27
PDLIM1O00151 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM1O00151 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDLIM1O00151 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM1O00151 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM1O00151 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PDLIM1O00151 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM1O00151 GPAT2P1-201ENST00000444924 1672 ntBASIC16.72■□□□□ 0.27
PDLIM1O00151 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM1O00151 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PDLIM1O00151 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM1O00151 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PDLIM1O00151 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM1O00151 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.72■□□□□ 0.27
PDLIM1O00151 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM1O00151 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
PDLIM1O00151 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM1O00151 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms