Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.37■□□□□ 0.21
C1QTNF9BB2RNN3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF9BB2RNN3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF9BB2RNN3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
C1QTNF9BB2RNN3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF9BB2RNN3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
C1QTNF9BB2RNN3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF9BB2RNN3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.37■□□□□ 0.21
C1QTNF9BB2RNN3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF9BB2RNN3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
C1QTNF9BB2RNN3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 MIR6080-201ENST00000617359 66 ntBASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C1QTNF9BB2RNN3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 MIR658-201ENST00000385210 100 ntBASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 SPCS2P4-201ENST00000436160 681 ntBASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 ACA64.2-201ENST00000459014 129 ntBASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 MIR6805-201ENST00000615055 62 ntBASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 AC138969.3-201ENST00000546612 1459 ntBASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 AC138932.2-201ENST00000548268 1459 ntBASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 AC126755.4-201ENST00000549796 1459 ntBASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.35■□□□□ 0.21
C1QTNF9BB2RNN3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 LINC00982-205ENST00000420957 435 ntBASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C1QTNF9BB2RNN3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms