Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV5A0A0B4J1U4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 BX842568.4-201ENST00000421222 227 ntBASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRGV5A0A0B4J1U4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 PKD1P1-201ENST00000458669 6805 ntBASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 LINC00982-205ENST00000420957 435 ntBASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 AC007967.2-201ENST00000432613 625 ntBASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 RPS15P9-201ENST00000494093 319 ntBASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 PGAM5P1-201ENST00000518923 814 ntBASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 LINC01451-201ENST00000623792 534 ntBASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV5A0A0B4J1U4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 AL354751.1-201ENST00000412768 1863 ntBASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.67■□□□□ 0.1
TRGV5A0A0B4J1U4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms