Protein–RNA interactions for Protein: Q9Y543

HES2, Transcription factor HES-2, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES2Q9Y543 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HES2Q9Y543 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
HES2Q9Y543 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HES2Q9Y543 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.96■□□□□ 0.63
HES2Q9Y543 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.96■□□□□ 0.63
HES2Q9Y543 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HES2Q9Y543 AC005104.2-201ENST00000427818 678 ntBASIC18.96■□□□□ 0.63
HES2Q9Y543 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.96■□□□□ 0.63
HES2Q9Y543 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
HES2Q9Y543 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.96■□□□□ 0.63
HES2Q9Y543 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 AC005593.1-201ENST00000624894 515 ntBASIC18.96■□□□□ 0.63
HES2Q9Y543 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 NCF1C-201ENST00000438382 1427 ntBASIC18.96■□□□□ 0.63
HES2Q9Y543 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.96■□□□□ 0.63
HES2Q9Y543 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
HES2Q9Y543 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.96■□□□□ 0.63
HES2Q9Y543 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.96■□□□□ 0.63
HES2Q9Y543 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
HES2Q9Y543 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HES2Q9Y543 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.96■□□□□ 0.63
HES2Q9Y543 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HES2Q9Y543 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HES2Q9Y543 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
HES2Q9Y543 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.95■□□□□ 0.62
HES2Q9Y543 AC092865.5-201ENST00000545435 363 ntBASIC18.95■□□□□ 0.62
HES2Q9Y543 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.95■□□□□ 0.62
HES2Q9Y543 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 AL139424.1-201ENST00000607572 797 ntBASIC18.95■□□□□ 0.62
HES2Q9Y543 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
HES2Q9Y543 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HES2Q9Y543 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HES2Q9Y543 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HES2Q9Y543 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HES2Q9Y543 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HES2Q9Y543 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.95■□□□□ 0.62
HES2Q9Y543 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HES2Q9Y543 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HES2Q9Y543 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HES2Q9Y543 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.94■□□□□ 0.62
HES2Q9Y543 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HES2Q9Y543 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HES2Q9Y543 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.94■□□□□ 0.62
HES2Q9Y543 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HES2Q9Y543 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.94■□□□□ 0.62
HES2Q9Y543 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HES2Q9Y543 KRT18P3-201ENST00000451602 1288 ntBASIC18.94■□□□□ 0.62
HES2Q9Y543 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.94■□□□□ 0.62
HES2Q9Y543 AC108751.1-201ENST00000490852 363 ntBASIC18.94■□□□□ 0.62
HES2Q9Y543 GPALPP1-207ENST00000611650 899 ntBASIC18.94■□□□□ 0.62
HES2Q9Y543 FAM197Y3-203ENST00000618346 717 ntBASIC18.94■□□□□ 0.62
HES2Q9Y543 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HES2Q9Y543 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HES2Q9Y543 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HES2Q9Y543 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.94■□□□□ 0.62
HES2Q9Y543 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.94■□□□□ 0.62
HES2Q9Y543 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HES2Q9Y543 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HES2Q9Y543 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HES2Q9Y543 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.94■□□□□ 0.62
HES2Q9Y543 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.94■□□□□ 0.62
HES2Q9Y543 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.94■□□□□ 0.62
HES2Q9Y543 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms