Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 AC069544.1-201ENST00000609399 999 ntBASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 AL121906.2-201ENST00000621597 723 ntBASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRCH1Q9Y2L9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
LRCH1Q9Y2L9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
LRCH1Q9Y2L9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 AC078925.2-201ENST00000624013 1973 ntBASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 GCSHP5-201ENST00000443090 522 ntBASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.7■□□□□ 0.26
LRCH1Q9Y2L9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 RNF216P1-203ENST00000404404 2427 ntBASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 AC144831.1-201ENST00000573312 2656 ntBASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 AC098590.1-201ENST00000468126 897 ntBASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 AC142381.4-202ENST00000563973 229 ntBASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 AC120498.8-201ENST00000614275 531 ntBASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 AC006557.6-201ENST00000623071 864 ntBASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRCH1Q9Y2L9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms