Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42EP3Q9UKI2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 MTCL1P1-201ENST00000446207 792 ntBASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 UNC93B6-202ENST00000528242 690 ntBASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 AC012640.2-201ENST00000561606 901 ntBASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 MIR3197-201ENST00000582241 73 ntBASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 ABALON-201ENST00000629058 1903 ntBASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.68□□□□□ -0.06
CDC42EP3Q9UKI2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 AC125634.1-201ENST00000438758 1403 ntBASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 LAGE3P1-201ENST00000425356 484 ntBASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 AP006288.1-201ENST00000446065 395 ntBASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 MTDHP4-201ENST00000600287 670 ntBASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 AC009102.3-201ENST00000623118 1491 ntBASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42EP3Q9UKI2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms