Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.15■□□□□ 0.5
HPS4Q9NQG7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
HPS4Q9NQG7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.15■□□□□ 0.5
HPS4Q9NQG7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.15■□□□□ 0.5
HPS4Q9NQG7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPS4Q9NQG7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.15■□□□□ 0.5
HPS4Q9NQG7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPS4Q9NQG7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPS4Q9NQG7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HPS4Q9NQG7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HPS4Q9NQG7 AC132938.5-201ENST00000624980 1813 ntBASIC18.14■□□□□ 0.5
HPS4Q9NQG7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
HPS4Q9NQG7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 AL096828.2-201ENST00000567259 1965 ntBASIC18.14■□□□□ 0.49
HPS4Q9NQG7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 AC112482.1-201ENST00000492080 688 ntBASIC18.14■□□□□ 0.49
HPS4Q9NQG7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 PGM5P2-202ENST00000637225 1043 ntBASIC18.14■□□□□ 0.49
HPS4Q9NQG7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 LTB4R2-202ENST00000528054 3092 ntBASIC18.14■□□□□ 0.49
HPS4Q9NQG7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HPS4Q9NQG7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AC148477.5-201ENST00000625164 1645 ntBASIC18.13■□□□□ 0.49
HPS4Q9NQG7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AC023274.1-201ENST00000418278 595 ntBASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AL020989.1-201ENST00000422979 469 ntBASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AC004832.2-201ENST00000426397 482 ntBASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AC108751.1-201ENST00000490852 363 ntBASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AC064836.3-201ENST00000607928 673 ntBASIC18.13■□□□□ 0.49
HPS4Q9NQG7 AL589182.2-201ENST00000619332 1049 ntBASIC18.13■□□□□ 0.49
HPS4Q9NQG7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HPS4Q9NQG7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 AC020916.1-201ENST00000587762 1774 ntBASIC18.12■□□□□ 0.49
HPS4Q9NQG7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS4Q9NQG7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms