Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.53■□□□□ 0.72
VTA1Q9NP79 ACTG1P14-201ENST00000446382 1122 ntBASIC19.53■□□□□ 0.72
VTA1Q9NP79 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
VTA1Q9NP79 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.53■□□□□ 0.72
VTA1Q9NP79 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.53■□□□□ 0.72
VTA1Q9NP79 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.53■□□□□ 0.72
VTA1Q9NP79 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
VTA1Q9NP79 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTA1Q9NP79 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.53■□□□□ 0.72
VTA1Q9NP79 REXO1L11P-201ENST00000620964 1927 ntBASIC19.53■□□□□ 0.72
VTA1Q9NP79 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.52■□□□□ 0.72
VTA1Q9NP79 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 AL031432.2-201ENST00000566714 459 ntBASIC19.52■□□□□ 0.72
VTA1Q9NP79 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 AL928711.1-201ENST00000570165 459 ntBASIC19.52■□□□□ 0.72
VTA1Q9NP79 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 AC138028.4-201ENST00000564984 1845 ntBASIC19.52■□□□□ 0.72
VTA1Q9NP79 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VTA1Q9NP79 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.52■□□□□ 0.72
VTA1Q9NP79 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.52■□□□□ 0.71
VTA1Q9NP79 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 FAM58CP-201ENST00000435741 640 ntBASIC19.51■□□□□ 0.71
VTA1Q9NP79 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VTA1Q9NP79 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.51■□□□□ 0.71
VTA1Q9NP79 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 FAM185BP-201ENST00000443595 716 ntBASIC19.5■□□□□ 0.71
VTA1Q9NP79 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 AL139327.4-201ENST00000612362 153 ntBASIC19.5■□□□□ 0.71
VTA1Q9NP79 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.5■□□□□ 0.71
VTA1Q9NP79 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VTA1Q9NP79 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms