Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LITAFQ99732 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.68□□□□□ -0.54
LITAFQ99732 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
LITAFQ99732 DBET-201ENST00000630918 3363 ntBASIC11.68□□□□□ -0.54
LITAFQ99732 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC11.68□□□□□ -0.54
LITAFQ99732 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 MIR663A-201ENST00000385250 93 ntBASIC11.68□□□□□ -0.54
LITAFQ99732 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 AC026271.3-201ENST00000571884 352 ntBASIC11.68□□□□□ -0.54
LITAFQ99732 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC11.68□□□□□ -0.54
LITAFQ99732 MIR4674-201ENST00000582457 87 ntBASIC11.68□□□□□ -0.54
LITAFQ99732 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC11.68□□□□□ -0.54
LITAFQ99732 MTDHP1-201ENST00000605323 784 ntBASIC11.68□□□□□ -0.54
LITAFQ99732 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC11.68□□□□□ -0.54
LITAFQ99732 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LITAFQ99732 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
LITAFQ99732 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.68□□□□□ -0.54
LITAFQ99732 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC11.68□□□□□ -0.54
LITAFQ99732 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC11.68□□□□□ -0.54
LITAFQ99732 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC11.68□□□□□ -0.54
LITAFQ99732 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
LITAFQ99732 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
LITAFQ99732 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LITAFQ99732 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.68□□□□□ -0.54
LITAFQ99732 ADM-208ENST00000534464 1640 ntTSL 2 BASIC11.68□□□□□ -0.54
LITAFQ99732 AC099063.4-201ENST00000641099 1602 ntBASIC11.68□□□□□ -0.54
LITAFQ99732 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LITAFQ99732 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LITAFQ99732 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LITAFQ99732 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.67□□□□□ -0.54
LITAFQ99732 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
LITAFQ99732 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LITAFQ99732 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
LITAFQ99732 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.67□□□□□ -0.54
LITAFQ99732 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.67□□□□□ -0.54
LITAFQ99732 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LITAFQ99732 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LITAFQ99732 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LITAFQ99732 GUK1-205ENST00000366722 850 ntTSL 3 BASIC11.67□□□□□ -0.54
LITAFQ99732 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
LITAFQ99732 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC11.67□□□□□ -0.54
LITAFQ99732 RPS2P4-201ENST00000476944 856 ntBASIC11.67□□□□□ -0.54
LITAFQ99732 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
LITAFQ99732 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC11.67□□□□□ -0.54
LITAFQ99732 AC124947.2-201ENST00000547118 1133 ntBASIC11.67□□□□□ -0.54
LITAFQ99732 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC11.67□□□□□ -0.54
LITAFQ99732 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC11.67□□□□□ -0.54
LITAFQ99732 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC11.67□□□□□ -0.54
LITAFQ99732 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC11.67□□□□□ -0.54
LITAFQ99732 AC073111.5-205ENST00000641717 521 ntBASIC11.67□□□□□ -0.54
LITAFQ99732 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LITAFQ99732 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.67□□□□□ -0.54
LITAFQ99732 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LITAFQ99732 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LITAFQ99732 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LITAFQ99732 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms