Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEK1Q96PY6 RCN1P2-201ENST00000398357 915 ntBASIC20.77■□□□□ 0.92
NEK1Q96PY6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEK1Q96PY6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEK1Q96PY6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.77■□□□□ 0.92
NEK1Q96PY6 AC096582.2-201ENST00000510860 516 ntBASIC20.77■□□□□ 0.92
NEK1Q96PY6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEK1Q96PY6 AC012615.1-201ENST00000565797 1299 ntBASIC20.77■□□□□ 0.92
NEK1Q96PY6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
NEK1Q96PY6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEK1Q96PY6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.77■□□□□ 0.92
NEK1Q96PY6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NEK1Q96PY6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
NEK1Q96PY6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.77■□□□□ 0.91
NEK1Q96PY6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.76■□□□□ 0.91
NEK1Q96PY6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 AC111152.3-201ENST00000569699 673 ntBASIC20.76■□□□□ 0.91
NEK1Q96PY6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEK1Q96PY6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NEK1Q96PY6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 AD001527.2-201ENST00000622994 785 ntBASIC20.75■□□□□ 0.91
NEK1Q96PY6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEK1Q96PY6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.75■□□□□ 0.91
NEK1Q96PY6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 AC012313.1-201ENST00000593393 3059 ntBASIC20.74■□□□□ 0.91
NEK1Q96PY6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 POM121L3P-201ENST00000419331 1163 ntBASIC20.74■□□□□ 0.91
NEK1Q96PY6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 AP001094.4-201ENST00000579008 2176 ntBASIC20.74■□□□□ 0.91
NEK1Q96PY6 STK25P1-201ENST00000585406 838 ntBASIC20.74■□□□□ 0.91
NEK1Q96PY6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.74■□□□□ 0.91
NEK1Q96PY6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NEK1Q96PY6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms