Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 AF186192.3-201ENST00000583427 947 ntBASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 AC022898.2-201ENST00000616822 1312 ntBASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 AC092068.3-201ENST00000587894 2016 ntBASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 RARRES2P10-201ENST00000564312 460 ntBASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 AC073195.1-201ENST00000607241 877 ntBASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 AL353708.3-201ENST00000610272 989 ntBASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 AL031985.4-201ENST00000642138 673 ntBASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 AC132872.4-202ENST00000622924 2756 ntBASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHMP6Q96FZ7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHMP6Q96FZ7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
CHMP6Q96FZ7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.71■□□□□ 0.42
CHMP6Q96FZ7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHMP6Q96FZ7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 HYMAI-201ENST00000635591 3347 ntBASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP6Q96FZ7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms