Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM43Q96BQ3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 AC026150.2-201ENST00000564693 1156 ntBASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 AC129492.6-201ENST00000611383 1305 ntBASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 AL096828.2-201ENST00000567259 1965 ntBASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM43Q96BQ3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM43Q96BQ3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 AC087163.2-201ENST00000457299 853 ntBASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM43Q96BQ3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 MYCLP1-201ENST00000372451 1075 ntBASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 SPDYE14P-201ENST00000442619 822 ntBASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 CR383656.12-201ENST00000549567 513 ntBASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 LINC01225-203ENST00000563550 1244 ntBASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 RARRES2P8-201ENST00000566335 367 ntBASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 AL645728.2-201ENST00000641974 660 ntBASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 AKAP8P1-201ENST00000434743 1349 ntBASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms