Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
COL23A1Q86Y22 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL23A1Q86Y22 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.83■■□□□ 1.09
COL23A1Q86Y22 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.83■■□□□ 1.08
COL23A1Q86Y22 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL23A1Q86Y22 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL23A1Q86Y22 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.83■■□□□ 1.08
COL23A1Q86Y22 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
COL23A1Q86Y22 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL23A1Q86Y22 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.83■■□□□ 1.08
COL23A1Q86Y22 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.83■■□□□ 1.08
COL23A1Q86Y22 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 UXT-AS1-201ENST00000590504 1525 ntBASIC21.82■■□□□ 1.08
COL23A1Q86Y22 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 SPDYE7P-202ENST00000420373 878 ntBASIC21.82■■□□□ 1.08
COL23A1Q86Y22 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 RN7SL692P-201ENST00000464677 288 ntBASIC21.82■■□□□ 1.08
COL23A1Q86Y22 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 AC004890.2-204ENST00000481968 304 ntBASIC21.82■■□□□ 1.08
COL23A1Q86Y22 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 AC084121.4-201ENST00000641598 221 ntBASIC21.82■■□□□ 1.08
COL23A1Q86Y22 AF228730.8-201ENST00000642140 221 ntBASIC21.82■■□□□ 1.08
COL23A1Q86Y22 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL23A1Q86Y22 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 AC116407.2-201ENST00000613639 860 ntBASIC21.81■■□□□ 1.08
COL23A1Q86Y22 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 GNAS-203ENST00000306120 1878 ntBASIC21.81■■□□□ 1.08
COL23A1Q86Y22 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL23A1Q86Y22 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 AL096828.2-201ENST00000567259 1965 ntBASIC21.8■■□□□ 1.08
COL23A1Q86Y22 MYCLP1-201ENST00000372451 1075 ntBASIC21.8■■□□□ 1.08
COL23A1Q86Y22 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 PIN1P1-201ENST00000412108 996 ntBASIC21.8■■□□□ 1.08
COL23A1Q86Y22 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 IGHV3-62-201ENST00000520057 340 ntBASIC21.8■■□□□ 1.08
COL23A1Q86Y22 AC107918.2-201ENST00000530817 355 ntBASIC21.8■■□□□ 1.08
COL23A1Q86Y22 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.8■■□□□ 1.08
COL23A1Q86Y22 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms