Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.53■□□□□ 0.42e-6■□□□□ 9.8
LARP4Q71RC2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.072e-6■□□□□ 9.8
LARP4Q71RC2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.062e-6■□□□□ 9.8
LARP4Q71RC2 OCIAD1-203ENST00000396448 1306 ntTSL 1 (best) BASIC10.91□□□□□ -0.662e-6■□□□□ 9.8
LARP4Q71RC2 OCIAD1-205ENST00000444354 1756 ntTSL 3 BASIC10.85□□□□□ -0.672e-6■□□□□ 9.8
LARP4Q71RC2 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.712e-6■□□□□ 9.8
LARP4Q71RC2 OCIAD1-201ENST00000264312 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.772e-6■□□□□ 9.8
LARP4Q71RC2 OCIAD1-206ENST00000502972 1916 ntTSL 27.29□□□□□ -1.242e-6■□□□□ 9.8
LARP4Q71RC2 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.36□□□□□ -1.392e-6■□□□□ 9.8
LARP4Q71RC2 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.35□□□□□ -0.273e-8■□□□□ 9.8
LARP4Q71RC2 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.453e-8■□□□□ 9.8
LARP4Q71RC2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.183e-6■□□□□ 9.8
LARP4Q71RC2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.093e-6■□□□□ 9.8
LARP4Q71RC2 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.293e-6■□□□□ 9.8
LARP4Q71RC2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.786e-9■□□□□ 9.8
LARP4Q71RC2 CXCL16-205ENST00000576153 1484 ntTSL 29.93□□□□□ -0.826e-9■□□□□ 9.8
LARP4Q71RC2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.15■□□□□ 0.181e-7■□□□□ 9.8
LARP4Q71RC2 ELOB-201ENST00000262306 582 ntTSL 2 BASIC9.95□□□□□ -0.821e-7■□□□□ 9.8
LARP4Q71RC2 ELOB-203ENST00000409906 991 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.851e-7■□□□□ 9.8
LARP4Q71RC2 ELOB-204ENST00000494946 472 ntTSL 28.69□□□□□ -1.021e-7■□□□□ 9.8
LARP4Q71RC2 ELOB-205ENST00000572954 331 ntTSL 2 BASIC8.62□□□□□ -1.031e-7■□□□□ 9.8
LARP4Q71RC2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.47■□□□□ 0.231e-6■□□□□ 9.8
LARP4Q71RC2 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.371e-6■□□□□ 9.8
LARP4Q71RC2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.22■□□□□ 0.833e-21■□□□□ 9.8
LARP4Q71RC2 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.213e-21■□□□□ 9.8
LARP4Q71RC2 TM7SF2-217ENST00000530650 2094 ntTSL 1 (best)21.4■■□□□ 1.021e-10■□□□□ 9.8
LARP4Q71RC2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.831e-10■□□□□ 9.8
LARP4Q71RC2 TM7SF2-216ENST00000529601 1671 ntTSL 219.85■□□□□ 0.771e-10■□□□□ 9.8
LARP4Q71RC2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.571e-10■□□□□ 9.8
LARP4Q71RC2 TM7SF2-214ENST00000529292 1305 ntTSL 518.31■□□□□ 0.521e-10■□□□□ 9.8
LARP4Q71RC2 TM7SF2-206ENST00000526048 1168 ntTSL 515.1■□□□□ 0.011e-10■□□□□ 9.8
LARP4Q71RC2 BAX-212ENST00000515540 300 ntTSL 314.37□□□□□ -0.114e-8■□□□□ 9.8
LARP4Q71RC2 SUB1-205ENST00000504789 570 ntTSL 417.82■□□□□ 0.443e-12■□□□□ 9.8
LARP4Q71RC2 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.713e-12■□□□□ 9.8
LARP4Q71RC2 SUB1-209ENST00000511615 1658 ntTSL 1 (best)9.4□□□□□ -0.93e-12■□□□□ 9.8
LARP4Q71RC2 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.033e-12■□□□□ 9.8
LARP4Q71RC2 SUB1-204ENST00000504016 509 ntTSL 36.01□□□□□ -1.453e-12■□□□□ 9.8
LARP4Q71RC2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.53e-12■□□□□ 9.8
LARP4Q71RC2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.53e-12■□□□□ 9.8
LARP4Q71RC2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.573e-12■□□□□ 9.8
LARP4Q71RC2 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.161e-323■□□□□ 9.8
LARP4Q71RC2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.996e-15■□□□□ 9.8
LARP4Q71RC2 F7-203ENST00000444337 564 ntTSL 518.21■□□□□ 0.517e-7■□□□□ 9.8
LARP4Q71RC2 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.3□□□□□ -0.445e-10■□□□□ 9.8
LARP4Q71RC2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.15■■□□□ 1.36e-8■□□□□ 9.8
LARP4Q71RC2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.986e-8■□□□□ 9.8
LARP4Q71RC2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.2■□□□□ 0.986e-8■□□□□ 9.8
LARP4Q71RC2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.2■□□□□ 0.986e-8■□□□□ 9.8
LARP4Q71RC2 CLTA-208ENST00000493185 714 ntTSL 318.74■□□□□ 0.596e-8■□□□□ 9.8
LARP4Q71RC2 CLTA-205ENST00000464497 1890 ntTSL 518.14■□□□□ 0.496e-8■□□□□ 9.8
LARP4Q71RC2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.496e-8■□□□□ 9.8
LARP4Q71RC2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.046e-8■□□□□ 9.8
LARP4Q71RC2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.75□□□□□ -0.056e-8■□□□□ 9.8
LARP4Q71RC2 CSE1L-203ENST00000469700 1401 ntTSL 1 (best)4.63□□□□□ -1.671e-13■□□□□ 9.8
LARP4Q71RC2 DKC1-212ENST00000492372 406 ntTSL 27.68□□□□□ -1.188e-19■□□□□ 9.8
LARP4Q71RC2 RPL23-210ENST00000584583 429 ntTSL 26.78□□□□□ -1.324e-59■□□□□ 9.7
LARP4Q71RC2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.048e-9■□□□□ 9.7
LARP4Q71RC2 MRPL52-206ENST00000461594 375 ntTSL 312.61□□□□□ -0.396e-9■□□□□ 9.7
LARP4Q71RC2 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.06□□□□□ -1.121e-323■□□□□ 9.7
LARP4Q71RC2 VCP-207ENST00000493886 2942 ntTSL 213.62□□□□□ -0.232e-6■□□□□ 9.7
LARP4Q71RC2 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.32e-6■□□□□ 9.7
LARP4Q71RC2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.915e-7■□□□□ 9.7
LARP4Q71RC2 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.9■□□□□ 0.38e-9■□□□□ 9.7
LARP4Q71RC2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.01■□□□□ 0.158e-9■□□□□ 9.7
LARP4Q71RC2 PC-206ENST00000528224 1008 ntTSL 213.99□□□□□ -0.178e-9■□□□□ 9.7
LARP4Q71RC2 PC-202ENST00000393958 4005 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.818e-9■□□□□ 9.7
LARP4Q71RC2 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.848e-9■□□□□ 9.7
LARP4Q71RC2 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.898e-9■□□□□ 9.7
LARP4Q71RC2 AMBP-202ENST00000466610 579 ntTSL 39.8□□□□□ -0.847e-46■□□□□ 9.7
LARP4Q71RC2 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.358e-8■□□□□ 9.7
LARP4Q71RC2 USP11-206ENST00000469080 3467 ntTSL 1 (best)11.9□□□□□ -0.58e-8■□□□□ 9.7
LARP4Q71RC2 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.848e-8■□□□□ 9.7
LARP4Q71RC2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.182e-7■□□□□ 9.7
LARP4Q71RC2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.832e-7■□□□□ 9.7
LARP4Q71RC2 PLEKHB1-205ENST00000426191 2022 ntTSL 219.92■□□□□ 0.782e-7■□□□□ 9.7
LARP4Q71RC2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.512e-7■□□□□ 9.7
LARP4Q71RC2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.242e-7■□□□□ 9.7
LARP4Q71RC2 RPL36-207ENST00000582463 239 ntTSL 518.16■□□□□ 0.52e-19■□□□□ 9.7
LARP4Q71RC2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.194e-10■□□□□ 9.7
LARP4Q71RC2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.124e-10■□□□□ 9.7
LARP4Q71RC2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -04e-10■□□□□ 9.7
LARP4Q71RC2 NDUFS2-203ENST00000465923 1193 ntTSL 313.33□□□□□ -0.284e-10■□□□□ 9.7
LARP4Q71RC2 NDUFS2-205ENST00000468828 899 ntTSL 310.86□□□□□ -0.674e-10■□□□□ 9.7
LARP4Q71RC2 DNAJC2-207ENST00000464253 1809 ntTSL 1 (best)9.11□□□□□ -0.954e-10■□□□□ 9.7
LARP4Q71RC2 DNAJC2-205ENST00000426036 729 ntTSL 55.6□□□□□ -1.514e-10■□□□□ 9.7
LARP4Q71RC2 NDUFS2-213ENST00000493849 910 ntTSL 35.25□□□□□ -1.574e-10■□□□□ 9.7
LARP4Q71RC2 RIF1-207ENST00000454583 3552 ntTSL 24.84□□□□□ -1.644e-10■□□□□ 9.7
LARP4Q71RC2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.93□□□□□ -1.784e-10■□□□□ 9.7
LARP4Q71RC2 DNAJC2-208ENST00000475065 1952 ntTSL 1 (best)2.3□□□□□ -2.044e-10■□□□□ 9.7
LARP4Q71RC2 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.62□□□□□ -0.231e-8■□□□□ 9.7
LARP4Q71RC2 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.271e-8■□□□□ 9.7
LARP4Q71RC2 DSTN-202ENST00000449141 795 ntTSL 313.27□□□□□ -0.291e-8■□□□□ 9.7
LARP4Q71RC2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.69□□□□□ -1.981e-6■□□□□ 9.7
LARP4Q71RC2 MRPL52-213ENST00000556465 220 ntTSL 314.44□□□□□ -0.15e-9■□□□□ 9.7
LARP4Q71RC2 RPL14-206ENST00000465280 616 ntTSL 215.04■□□□□ -07e-12■□□□□ 9.7
LARP4Q71RC2 RPL14-208ENST00000479563 794 ntTSL 1 (best)9.44□□□□□ -0.97e-12■□□□□ 9.7
LARP4Q71RC2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.12■□□□□ 0.333e-10■□□□□ 9.7
LARP4Q71RC2 RNASET2-202ENST00000358165 2445 ntTSL 216.34■□□□□ 0.213e-10■□□□□ 9.7
LARP4Q71RC2 SDHC-206ENST00000470743 832 ntTSL 58.22□□□□□ -1.097e-12■□□□□ 9.7
LARP4Q71RC2 DKK1-203ENST00000476752 544 ntTSL 23.95□□□□□ -1.787e-12■□□□□ 9.7
Retrieved 100 of 15,922 protein–RNA pairs in 303.8 ms