Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 AC026691.1-201ENST00000602502 2017 ntBASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
FOXR1Q6PIV2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 AC005332.1-201ENST00000577698 1310 ntBASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 KRT18P38-201ENST00000449496 1282 ntBASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 VENTXP5-201ENST00000523979 775 ntBASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 CKBP1-201ENST00000565489 1086 ntBASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXR1Q6PIV2 AC079328.2-201ENST00000561241 3354 ntBASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 AC005052.1-201ENST00000625181 2492 ntBASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 AL355312.1-201ENST00000407115 2176 ntBASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 CA15P1-201ENST00000481698 905 ntBASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
FOXR1Q6PIV2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
FOXR1Q6PIV2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.33■□□□□ 0.53
FOXR1Q6PIV2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXR1Q6PIV2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.33■□□□□ 0.53
FOXR1Q6PIV2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXR1Q6PIV2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXR1Q6PIV2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FOXR1Q6PIV2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXR1Q6PIV2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
FOXR1Q6PIV2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXR1Q6PIV2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 AC112907.2-201ENST00000448639 330 ntBASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms