Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 AC083906.2-201ENST00000511578 360 ntBASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 AL121906.2-201ENST00000621597 723 ntBASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 AL136379.1-201ENST00000623471 2642 ntBASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 AC023824.1-201ENST00000562945 2975 ntBASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KCNIP4Q6PIL6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 AC060834.1-201ENST00000443027 2032 ntBASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 AL160286.2-201ENST00000567150 934 ntBASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 AC093010.1-201ENST00000473625 1624 ntBASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KCNIP4Q6PIL6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 OR2I1P-210ENST00000642037 4691 ntBASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KCNIP4Q6PIL6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms